Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g1053 | ATGGCCTTTGATGGATGCTGTCCTGACTGTAAACTTCCTGGCGACGACTGCCCACTGATGTGGGGAGCATGCAATCATGCATTTCATTTGCACTGTATTCTAAAATGGGTGAATTCTCAGACATCACAAGCTCATTGTCCCATGTGCCGAAGAGAATGGCAGTTTAAAGCGTGA | 174 | 0.4655 | MAFDGCCPDCKLPGDDCPLMWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKA* | 58 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g1053 | 57 | SUPERFAMILY | RING/U-box | 2 | 56 | - | - | |
Ahy9g1053 | 57 | ProSiteProfiles | Zinc finger RING-type profile. | 7 | 50 | IPR001841 | - | |
Ahy9g1053 | 57 | PANTHER | ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 | 1 | 57 | - | - | |
Ahy9g1053 | 57 | CDD | RING-H2_APC11 | 1 | 55 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
Ahy9g1053 | 57 | Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger | 1 | 56 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
Ahy9g1053 | 57 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 57 | IPR013083 | - | |
Ahy9g1053 | 57 | PANTHER | RING BOX | 1 | 57 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g1053 | Ahy-Chr9 | 21381263 | 21383889 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g1053 | 7 | 50 | C3H Transcription Factor Family | AT1G72220 | 41.304 | 4.42e-07 | 42.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g1053 | K03358 | - | twl:119990773 | 139.428 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g1330 | 19 | 27770875 | 27774613 | Ahy9g1053 | 9 | 21381263 | 21383889 | hybridization |