Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1046 ATGGGAAGGCACTCTTGCTGCTACAAGCAGAAGCTAAGAAAAGGACTCTGGTCCCCAGAGGAAGATGAGAAGCTTCTCAATTATATCACCAACCATGGTCATGGATGTTGGAGCTCTGTCCCCAAACTAGCAGGATTGCAGAGATGTGGGAAGAGCTGCAGATTAAGATGGATAAATTACCTGAGGCCAGATTTGAAGAGAGGAGCATTCTCACAGGAGGAAGAGGATTTGATAATTGAACTCCATGCAGTTCTTGGAAACCGGTGGTCTCAGATTGCAGCACGGTTACCGGGAAGAACCGACAATGAGATAAAGAATCTATGGAACTCTTGCCTCAAGAAGAAGCTGAGGCAGAAAGGGATTGACCCAATCACAAACAAGCCACTCTCCGATGTGGTGCCTATTGAGAATAACAAGAACAAGAAGGAGGAGGAGGAGAAGCCACCAACAACAACAGAAAGGTTTGAAGGGCCTCCTTCTGATTCTGTAGGAGGATACTTTTCCTTCAATTATCAGCAAATGATGAACAATTTTGGAGCAACTCCACCAAACGCCACATCGAGTGACGCTAACTTTGTTGCTAACAACATTCTAACATGGGAACAAGAAGAGGTAAAATGGTGTGAGTATCTTAACACCCTTCTTCTCAACAACACGGTAGTTCAGAATCATTCTTCTTCTTCTTCTCATTCTGTTATGTATGGTGGTGGTGGTGGTGAGGTTATTACTGAGCCAGAAACAACAAGCTTCATGAGACAAGACTCATCAAGTAGTAGTTGGCACCACCATAGCCAGCAACAACCTCATCAATTCTCAGATATGTATACCAAGGATCTGCAGAGATTTTCAGTGGCTTTTGGCCAATCCATGTAG 873 0.4422 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCLKKKLRQKGIDPITNKPLSDVVPIENNKNKKEEEEKPPTTTERFEGPPSDSVGGYFSFNYQQMMNNFGATPPNATSSDANFVANNILTWEQEEVKWCEYLNTLLLNNTVVQNHSSSSSHSVMYGGGGGEVITEPETTSFMRQDSSSSSWHHHSQQQPHQFSDMYTKDLQRFSVAFGQSM* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1046 290 MobiDBLite consensus disorder prediction 249 270 - -
Ahy9g1046 290 PANTHER MYB DOMAIN PROTEIN 55 183 283 - -
Ahy9g1046 290 SMART sant 66 114 IPR001005 -
Ahy9g1046 290 SMART sant 13 63 IPR001005 -
Ahy9g1046 290 Gene3D - 69 151 - -
Ahy9g1046 290 PANTHER HOMEODOMAIN-RELATED 1 148 - -
Ahy9g1046 290 PANTHER HOMEODOMAIN-RELATED 183 283 - -
Ahy9g1046 290 MobiDBLite consensus disorder prediction 136 152 - -
Ahy9g1046 290 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy9g1046 290 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy9g1046 290 CDD SANT 17 61 IPR001005 -
Ahy9g1046 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy9g1046 290 Gene3D - 11 67 - -
Ahy9g1046 290 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy9g1046 290 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy9g1046 290 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy9g1046 290 CDD SANT 69 109 IPR001005 -
Ahy9g1046 290 MobiDBLite consensus disorder prediction 127 159 - -
Ahy9g1046 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy9g1046 290 PANTHER MYB DOMAIN PROTEIN 55 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1046 Ahy-Chr9 21102642 21104314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1046 1 287 MYB Transcription Factor Family AT1G57560 50.654 3.94e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g1046 Myb_DNA-binding 5.30E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1046 K09422 - qsu:112017656 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1318 19 27168123 27169810 Ahy9g1046 9 21102642 21104314 hybridization
Ahy16g0838 16 15018511 15020057 Ahy9g1046 9 21102642 21104314 PCT
Ahy6g0514 6 6259497 6261105 Ahy9g1046 9 21102642 21104314 PCT
Ahy9g1046 9 21102642 21104314 Ahy16g0838 16 15018511 15020057 PCT
Ahy9g1046 9 21102642 21104314 Ahy6g0514 6 6259497 6261105 PCT