Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1039 ATGGATGATGTGGCTATTCAAAGCCACCTCCAACTTATGGCCCAAAATGAAACTCAGATAGCGGGAGTGTGTTCTTCTTTGGCTAAGTATATTGCTGGAGTTATGGCCGGCGTAGAGGGTGAGAGGAAATACGTGAACGATGGCAAACTTATTAACATGATGGTCATTCATATTGAGAATGATGGTTTAAAGCTTAATATTGTTGTTCTTGGAGAGATGGTGGACCGGATCAAGTATTTTCTGGCATCGGGCGATCAACAACTGCCAATAATTATTTTTCAATTTGCAAGAGTAAAAAATGCTGGAGGTACCAATATTGTGCAGAACATTATGTATGGTACTAGACTCTTGATAAATCCAGATATTCCTGAGGCTTTGATGCTTCGAAAAAGAGAGATCTCGCAGTACCTGTCTGTGATTTCTGGCAAACCAGCATATCTTGATGAAGATGAAGTTTTATATTCCACTGGGAGGAAGACAATAAAGGAGTTACGTACTGCTACGGATGTTGGATTCTATGTTGTTCGGGCCACTGTTCTTGATGTTGAACCCGTTCCAAGTTGGTGGTATAAATCATGTGTTTGCAGCGTGAAGGCAGAAGCTAATGCGGATGAATACTTCTGCGATGGCTGTAATGGGAACGTGAATAATGTGGTTGACAGGTATAAGTTAAATTTGTTGGTTTTTGATGGTACTGGTACAACGAACTTTGTTGTGTTCGATAAAGGAGGTCGCAGCTCTATTCGGACGAACCTGTACTGA 762 0.4121 MDDVAIQSHLQLMAQNETQIAGVCSSLAKYIAGVMAGVEGERKYVNDGKLINMMVIHIENDGLKLNIVVLGEMVDRIKYFLASGDQQLPIIIFQFARVKNAGGTNIVQNIMYGTRLLINPDIPEALMLRKREISQYLSVISGKPAYLDEDEVLYSTGRKTIKELRTATDVGFYVVRATVLDVEPVPSWWYKSCVCSVKAEANADEYFCDGCNGNVNNVVDRYKLNLLVFDGTGTTNFVVFDKGGRSSIRTNLY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1039 253 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 32 242 - -
Ahy9g1039 253 SUPERFAMILY Nucleic acid-binding proteins 157 244 IPR012340 -
Ahy9g1039 253 CDD RPA1_DBD_C 159 241 IPR013955 -
Ahy9g1039 253 Gene3D - 13 136 IPR012340 -
Ahy9g1039 253 PANTHER REPLICATION FACTOR A 1, RFA1 32 242 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy9g1039 253 Pfam Replication factor-A C terminal domain 172 245 IPR013955 -
Ahy9g1039 253 Gene3D - 151 250 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1039 Ahy-Chr9 20863561 20865445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1039 47 241 Core DNA Replication Machinery Family AT5G61000 23.923 6.42e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1039 - - ahf:112708995 494.197