Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy9g1036 | ATGTCATCCTCAAGGCCTAGCCAATCTTCTAGCAATTCGGGGAGATCAAGACATAGCGCTAGAATTATTGCTCAGACCACTGTAGATGCAAAGCTCCATGCTAGTTTTGAGGAGTCTGGTAGTTCCTTTGACTACTCTAGTTCGGTGCGCGCCTCCGGCTCAGCTGATGGAGAAAATCAACCAAGAACAGATAAAGTAACAACAGCTTACCTCCATCACATACAGAAAGGCAAGATGATTCAACCCTTTGGGTGCTTGCTGGCCTTGGATGAGAAAACATGCAAGGTGATTGCTTACACTGAGAATGCACCAGAGATGCTGACCATGGCGAGTCATGCTGTTCCCAGTGTTGGTGACCACCCTGCCCTTGGCATTGGCACCGACATAAGAACTATTTTCACTGCTCCAAGTGCTTCGGCATTGCAGAAAGCACTAGGATTTGGAGAAGTTCATCTTCTTAACCCCATCCTAGTTCATTGCAAGACTTCTGGGAAACCCTTCTATGCTATTCTCCATCGTGTTACTGGTAGTTTGATTATTGACTTTGAGCCCGTCAAGCCTTATGAAGTTCCTATGACTGCAGCAGGTGCTCTGCAATCCTACAAGCTTGCTGCGAAAGCAATCACCCGATTGCAGTCTTTGCCTAGTGGGAGCATGGAAAGGCTATGTGATACAATGGTTCAAGAAGTTTTTGAACTCACGGGTTATGACAGGGTGATGGCTTATAAATTTCATGAGGATGATCATGGGGAAGTGATTGCTGAGTTAACAAAGCCAGGACTTGAACCATATCTTGGGTTGCACTATCCGTCCACTGATATTCCCCAGGCTGCACGTTTTTTGTTCTTGAAGAACAAGGTCCGTATGATTGTTGATTGTCATGCAAAACATGTAAAGGTTGTTCAAGATGAGAAGCTGCCATTCGATTTGACTTTGTGTGGTTCAACCTTAAGAGCTCCTCATAGTTGCCATTTGCAATACATGTCAAACATGGATTCAATTGCTTCCCTAGTTATGGCAGTTATAGTCAATGACAGCGATGAAGATGCGGACAACTCTGATGCTGTTCAGCCACAAAAGAGAAAGCGACTCTGGGGCTTAGTTGTTTGTCATAACACTACTCCCAGGTTTGTTCCTTTTCCTCTAAGGTATGCTTGTGAGTTTCTGACACAAGTATTTGCCATCCATGTCAACAGAGAAATAGAGTTAGAATATCAGATTACTGAAAAGAATATCCTTCGCACTCAGACGCTCTTGTGTGATATGCTGATGCGAGATGCACCCCTAGGAATTGTATCACAAAGCCCTAATATAATGGACCTAGTTAAATGTGATGGGGCTTCCCTCTTGTATAAAAACAAGGTATGGAGATTAGGAGTAACACCTACTGAATCTCATATAAGAGAGATAGCTTTGTGGTTGTCTGAGCACCATATGGATTCCACAGGTCTTAGTACAGATAGCTTGTATGATGCCGGGTTCCCAGGGGCTCTGTCTCTTGGTGATGTAGTATGTGGAATGGCAGCGGTTAGAATAACTGAGAAAGACATAGTTTTCTGGTTTCGATCACACACAGCTGCAGAAATCAGATGGGGTGGTGCAAAGCATGACCCTGGTGAAAAGGACGACGGCAGGAGGATGCATCCACGGTCATCTTTCAAGGCTTTCCTTGAAGTTGTTAAGTCAAGGAGCTTACCGTGGAAAGACTACGAGATGGATGCTATTCATTCATTGCAACTAATACTAAGAAATGCATTCAAAGAGATGGATAGTATGGACATAACCACAAATGCAATAAATACAAGGCTGAATGATTTGAGGATTGAAGGGATGCAGGAACTGGAAGCCGTGACAAGTGAGATGGTTAGATTAATTGAAACTGCAACAGTACCTATTCTGGCTGTAGATGTTGATGGGCTGGTTAATGGATGGAATATAAAGATTGCCGAATTGACTGGCCTTTCGGTTGGTGATGCTATAGGGAAGCATCTTCTCACGCTCGTTGAGAACTCTTCAGTTGGTATAGTCAAGAAGATGCTTGAGATGGCATTGAAAGGTGAAGAAGAGAAAAACGTCCAATTTGAGATCAAAACACATGGGTCTAAAGTTGATTGTGGTCCTATTAGATTGGTAGTTAATGCTTGCGCAAGCCGGGATATTCATGATAATGTTGTGGGGGTTTGTTTTGTGGCCCAAGACATCACAGCTCAGAAGACTGTCATGGATAAATTTACCCGAATTGAAGGTGATTACAAGGCAATTGTACAGAATCCCAACCCATTGATCCCCCCAATATTTGGAACTGATGAATTTGGCTGGTGTTGTGAGTGGAATGCAGCTATGACAAAGGTGACCGGATGGAAGAGAGAAGAGGTGATGGATAAAATGCTTTTAGGAGAGGTTTTTGGGACTCAGATGGCTTGTTGTCGTCTTAAGAACCAAGAAGCTTTTGTTAATTTTGGTATTGTACTTAATAAAGCCATGACCGGTTTGGAGACAGCAAAGGTTGCTTTTGGTTTCTTTGCTCGTAGTGGGAAGTATGTAGAATGCCTGCTTTCGGTGAGTAAAAAATTGGACGTCGAAGGTGTAGTTACTGGGGTCTTCTGCTTCTTGCAGCTAGCTAGTCCAGAGCTGCAACAAGCATTGCATGTTCAGCGAATATCTGAACAAACTGCCTTGAAGAGACTGAAAGCTTTAACTTATATGAAGAGGCAGATCAGGAATCCTTTATCCGGGATGATGTTTTCGCGGAAAATGTTGGAGGCCACTGAGTTGGGAGCGGAACAAAAGCAACTCCTACACACCAGTGCTCAGTGCCAGTGCCAGCTTAGCAAAGTTCTTGATGACTCAGATCTTGACAGCATCATTGATGGTTACTTGGATCTTGAGATGGCTGAATTCACTCTGCATGATGTATTGGTTGCTTCCCTTAGTCAAGTAATGACAAAGAGTAACACCAAAGCTATCCGAATAGTCAACGATGTCAAAGAGCAAATTGTGACAGAAACCTTATACGGTGATAGTCTTAGGCTTCAGCAGGCCATAGCTGACTTCTTATTGATTTCCATAAACTTCACACCCAATGGAGGTCAAGTTGTAGTAACAGCCACTCTGACCAAAGAACAAATAGGGCAATCTGTCCATCTTGTTAATTTGGAGCTCAGCATAACACATGGTGGTAGTGGGGTGCCAGAAGCACTGCTGAACCAGATGTTTGAGAGTAATGGGGTTGAATCAGAGGAAGAAGGTATAAGCCTTCTCATAAGCAGAAAACTTCTAAAGCTGATGAATGGAGATGTGCGTTATGTAAGGGAAGCAGGCAAATCATCTTTTATCCTATCTGCTGAACTTGCCGCAGCTCATAAGTTGAAAGATTAG | 3378 | 0.4343 | MSSSRPSQSSSNSGRSRHSARIIAQTTVDAKLHASFEESGSSFDYSSSVRASGSADGENQPRTDKVTTAYLHHIQKGKMIQPFGCLLALDEKTCKVIAYTENAPEMLTMASHAVPSVGDHPALGIGTDIRTIFTAPSASALQKALGFGEVHLLNPILVHCKTSGKPFYAILHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAELTKPGLEPYLGLHYPSTDIPQAARFLFLKNKVRMIVDCHAKHVKVVQDEKLPFDLTLCGSTLRAPHSCHLQYMSNMDSIASLVMAVIVNDSDEDADNSDAVQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLTQVFAIHVNREIELEYQITEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGASLLYKNKVWRLGVTPTESHIREIALWLSEHHMDSTGLSTDSLYDAGFPGALSLGDVVCGMAAVRITEKDIVFWFRSHTAAEIRWGGAKHDPGEKDDGRRMHPRSSFKAFLEVVKSRSLPWKDYEMDAIHSLQLILRNAFKEMDSMDITTNAINTRLNDLRIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNIKIAELTGLSVGDAIGKHLLTLVENSSVGIVKKMLEMALKGEEEKNVQFEIKTHGSKVDCGPIRLVVNACASRDIHDNVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNAAMTKVTGWKREEVMDKMLLGEVFGTQMACCRLKNQEAFVNFGIVLNKAMTGLETAKVAFGFFARSGKYVECLLSVSKKLDVEGVVTGVFCFLQLASPELQQALHVQRISEQTALKRLKALTYMKRQIRNPLSGMMFSRKMLEATELGAEQKQLLHTSAQCQCQLSKVLDDSDLDSIIDGYLDLEMAEFTLHDVLVASLSQVMTKSNTKAIRIVNDVKEQIVTETLYGDSLRLQQAIADFLLISINFTPNGGQVVVTATLTKEQIGQSVHLVNLELSITHGGSGVPEALLNQMFESNGVESEEEGISLLISRKLLKLMNGDVRYVREAGKSSFILSAELAAAHKLKD* | 1126 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy9g1036 | 1125 | Gene3D | PAS domain | 74 | 321 | - | - | |
| Ahy9g1036 | 1125 | PANTHER | PHYTOCHROME A | 1 | 1120 | - | - | |
| Ahy9g1036 | 1125 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 218 | 391 | IPR016132 | - | |
| Ahy9g1036 | 1125 | ProSitePatterns | Phytochrome chromophore attachment site signature. | 318 | 327 | IPR013516 | - | |
| Ahy9g1036 | 1125 | Gene3D | - | 199 | 562 | IPR029016 | - | |
| Ahy9g1036 | 1125 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Ahy9g1036 | 1125 | CDD | PAS | 761 | 872 | IPR000014 | - | |
| Ahy9g1036 | 1125 | SMART | HisKA_10 | 894 | 959 | IPR003661 | GO:0000155|GO:0007165 | |
| Ahy9g1036 | 1125 | MobiDBLite | consensus disorder prediction | 39 | 63 | - | - | |
| Ahy9g1036 | 1125 | ProSiteProfiles | Histidine kinase domain profile. | 901 | 1119 | IPR005467 | - |
Showing 1 to 10 of 48 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy19g1307 | 19 | 26780666 | 26787283 | Ahy9g1036 | 9 | 20761020 | 20767545 | hybridization | |
| Ahy16g0834 | 16 | 14936740 | 14941084 | Ahy9g1036 | 9 | 20761020 | 20767545 | PCT | |
| Ahy6g0518 | 6 | 6314431 | 6318763 | Ahy9g1036 | 9 | 20761020 | 20767545 | PCT | |
| Ahy9g1036 | 9 | 20761020 | 20767545 | Ahy16g0834 | 16 | 14936740 | 14941084 | PCT | |
| Ahy9g1036 | 9 | 20761020 | 20767545 | Ahy6g0518 | 6 | 6314431 | 6318763 | PCT |
Showing 1 to 5 of 5 entries