Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1011 ATGAGAAGGCACTCTTGCTGTTACAATCAGAAGCTTCGAAAGGGTCTGTGGTCACCTGAGGAGGATGAGAAACTTCTCATGCATATTACTAAGTATGGTCATGGATGTTGGAGCTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGACTTAGGTGGATAAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAAGAAGAGAATCTCATCATTGAGCTTCATGGAGTATTGGGCAATAGATGGTCGCAAATTGCGGCACAATTGCCAGGGAGGACCGACAATGAGATAAAGAATCTGTGGAATTCTTGCTTGAAGAAGAAGCTGAGGCAGAGAGGTATAGACCCTGTGACACACAAGAAGATTCCGGAGGCCGAGAACGGCAGCGAGGACAACGACAACAGAAACCAAGAAAAGGCAGCAGAAGCATCGTCCAATGAGTTGAACAAATCAGATGATGCAACCCCCTATGTGCTAAACAGAGCATCTTCAATGAGTTGCCATCATCACTCAGATTTCATGAGTGGTTTTCCAATTCAGATGATAAATCATGCATCATCATCATCAGATTCAAATTCAGTTAATTGGTATAGCCACAGTAGTGGAAGGCCTTTTGATATCAACACTGATTTTCCATTCAATACCACTTCTATTCTTACACCAACAACCGCAACCGCAACCAATTTATTTCTTCCTACTGATTCTAGTTTCCTTTACAAGCCTTCTTTTTCTTCTTCTTCTTCCAACTCTCCTGAAAATATCTCTAATACTACACCCTATGGATTGAAAGAGGAACAATACCAAATTCACATGAGCATAGAAGAGTTAGAAGAATTATCATCCAAATGGGATGAGTATTATTACTACCTTCATAACCCAGTCTCAATGCCTGCTTCTTCTGAATCATTTTGCAATGAAATGAAGCCAGATATACACTATTTGATACCTGATACACCAGGTCCCATTATGTTACCTCACCATAATAATAATAATACCAAGTTCCAAGAACCATCTCAAATGGCTAGTTTCTTTTCAAAGGACATTCAGAAGCTCACAGCAGCATTTGGACATATATAA 1098 0.4044 MRRHSCCYNQKLRKGLWSPEEDEKLLMHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHGVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKKIPEAENGSEDNDNRNQEKAAEASSNELNKSDDATPYVLNRASSMSCHHHSDFMSGFPIQMINHASSSSDSNSVNWYSHSSGRPFDINTDFPFNTTSILTPTTATATNLFLPTDSSFLYKPSFSSSSSNSPENISNTTPYGLKEEQYQIHMSIEELEELSSKWDEYYYYLHNPVSMPASSESFCNEMKPDIHYLIPDTPGPIMLPHHNNNNTKFQEPSQMASFFSKDIQKLTAAFGHI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1011 365 Gene3D - 14 66 - -
Ahy9g1011 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy9g1011 365 Gene3D - 68 154 - -
Ahy9g1011 365 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy9g1011 365 CDD SANT 17 61 IPR001005 -
Ahy9g1011 365 MobiDBLite consensus disorder prediction 122 147 - -
Ahy9g1011 365 SMART sant 66 114 IPR001005 -
Ahy9g1011 365 SMART sant 13 63 IPR001005 -
Ahy9g1011 365 MobiDBLite consensus disorder prediction 122 160 - -
Ahy9g1011 365 PANTHER MYB DOMAIN PROTEIN 55 1 264 - -
Ahy9g1011 365 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy9g1011 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy9g1011 365 PANTHER HOMEODOMAIN-RELATED 1 264 - -
Ahy9g1011 365 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy9g1011 365 CDD SANT 69 109 IPR001005 -
Ahy9g1011 365 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy9g1011 365 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1011 Ahy-Chr9 20006077 20008438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1011 1 138 MYB Transcription Factor Family AT4G01680 89.130 1.99e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g1011 Myb_DNA-binding 5.20E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1011 K09422 - gmx:100782199 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1283 19 25755740 25757847 Ahy9g1011 9 20006077 20008438 hybridization
Ahy16g0802 16 14366514 14368683 Ahy9g1011 9 20006077 20008438 PCT
Ahy6g0540 6 6616143 6618358 Ahy9g1011 9 20006077 20008438 PCT
Ahy9g1011 9 20006077 20008438 Ahy16g0802 16 14366514 14368683 PCT
Ahy9g1011 9 20006077 20008438 Ahy6g0540 6 6616143 6618358 PCT