Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g1011 | ATGAGAAGGCACTCTTGCTGTTACAATCAGAAGCTTCGAAAGGGTCTGTGGTCACCTGAGGAGGATGAGAAACTTCTCATGCATATTACTAAGTATGGTCATGGATGTTGGAGCTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGACTTAGGTGGATAAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAAGAAGAGAATCTCATCATTGAGCTTCATGGAGTATTGGGCAATAGATGGTCGCAAATTGCGGCACAATTGCCAGGGAGGACCGACAATGAGATAAAGAATCTGTGGAATTCTTGCTTGAAGAAGAAGCTGAGGCAGAGAGGTATAGACCCTGTGACACACAAGAAGATTCCGGAGGCCGAGAACGGCAGCGAGGACAACGACAACAGAAACCAAGAAAAGGCAGCAGAAGCATCGTCCAATGAGTTGAACAAATCAGATGATGCAACCCCCTATGTGCTAAACAGAGCATCTTCAATGAGTTGCCATCATCACTCAGATTTCATGAGTGGTTTTCCAATTCAGATGATAAATCATGCATCATCATCATCAGATTCAAATTCAGTTAATTGGTATAGCCACAGTAGTGGAAGGCCTTTTGATATCAACACTGATTTTCCATTCAATACCACTTCTATTCTTACACCAACAACCGCAACCGCAACCAATTTATTTCTTCCTACTGATTCTAGTTTCCTTTACAAGCCTTCTTTTTCTTCTTCTTCTTCCAACTCTCCTGAAAATATCTCTAATACTACACCCTATGGATTGAAAGAGGAACAATACCAAATTCACATGAGCATAGAAGAGTTAGAAGAATTATCATCCAAATGGGATGAGTATTATTACTACCTTCATAACCCAGTCTCAATGCCTGCTTCTTCTGAATCATTTTGCAATGAAATGAAGCCAGATATACACTATTTGATACCTGATACACCAGGTCCCATTATGTTACCTCACCATAATAATAATAATACCAAGTTCCAAGAACCATCTCAAATGGCTAGTTTCTTTTCAAAGGACATTCAGAAGCTCACAGCAGCATTTGGACATATATAA | 1098 | 0.4044 | MRRHSCCYNQKLRKGLWSPEEDEKLLMHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHGVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKKIPEAENGSEDNDNRNQEKAAEASSNELNKSDDATPYVLNRASSMSCHHHSDFMSGFPIQMINHASSSSDSNSVNWYSHSSGRPFDINTDFPFNTTSILTPTTATATNLFLPTDSSFLYKPSFSSSSSNSPENISNTTPYGLKEEQYQIHMSIEELEELSSKWDEYYYYLHNPVSMPASSESFCNEMKPDIHYLIPDTPGPIMLPHHNNNNTKFQEPSQMASFFSKDIQKLTAAFGHI* | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g1011 | 365 | Gene3D | - | 14 | 66 | - | - | |
Ahy9g1011 | 365 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Ahy9g1011 | 365 | Gene3D | - | 68 | 154 | - | - | |
Ahy9g1011 | 365 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Ahy9g1011 | 365 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Ahy9g1011 | 365 | MobiDBLite | consensus disorder prediction | 122 | 147 | - | - | |
Ahy9g1011 | 365 | SMART | sant | 66 | 114 | IPR001005 | - | |
Ahy9g1011 | 365 | SMART | sant | 13 | 63 | IPR001005 | - | |
Ahy9g1011 | 365 | MobiDBLite | consensus disorder prediction | 122 | 160 | - | - | |
Ahy9g1011 | 365 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 264 | - | - | |
Ahy9g1011 | 365 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Ahy9g1011 | 365 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Ahy9g1011 | 365 | PANTHER | HOMEODOMAIN-RELATED | 1 | 264 | - | - | |
Ahy9g1011 | 365 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Ahy9g1011 | 365 | CDD | SANT | 69 | 109 | IPR001005 | - | |
Ahy9g1011 | 365 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
Ahy9g1011 | 365 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g1011 | Ahy-Chr9 | 20006077 | 20008438 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g1011 | 1 | 138 | MYB Transcription Factor Family | AT4G01680 | 89.130 | 1.99e-90 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Ahy9g1011 | Myb_DNA-binding | 5.20E-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g1011 | K09422 | - | gmx:100782199 | 379.793 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g1283 | 19 | 25755740 | 25757847 | Ahy9g1011 | 9 | 20006077 | 20008438 | hybridization | |
Ahy16g0802 | 16 | 14366514 | 14368683 | Ahy9g1011 | 9 | 20006077 | 20008438 | PCT | |
Ahy6g0540 | 6 | 6616143 | 6618358 | Ahy9g1011 | 9 | 20006077 | 20008438 | PCT | |
Ahy9g1011 | 9 | 20006077 | 20008438 | Ahy16g0802 | 16 | 14366514 | 14368683 | PCT | |
Ahy9g1011 | 9 | 20006077 | 20008438 | Ahy6g0540 | 6 | 6616143 | 6618358 | PCT |