Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0999 ATGGAAGGCAATCTAATTGGCAGAAAACTCAACCTTCTAGCTCATGATAGCTACCAAAGATTGGTTAAGGCTCTTGAACAAATGTTTGAAACTACCATATTTTTGAGAACTGAGTTAGATGCAGTACAAGCAGAGAGGTGCCATGTGCTAACTTATGAGGATGGAAAACGGGATTTGATTATGGTTGGGGATGTGTCTTGGGAGGTGTTCTTATCAGTTGTAAAGAAGTTGAAGATCACCAGATTTGACACATTTATCAAAAGAAGATGA 270 0.3852 MEGNLIGRKLNLLAHDSYQRLVKALEQMFETTIFLRTELDAVQAERCHVLTYEDGKRDLIMVGDVSWEVFLSVVKKLKITRFDTFIKRR* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0999 89 PANTHER AUXIN-INDUCED PROTEIN 1 85 - -
Ahy9g0999 89 SUPERFAMILY CAD & PB1 domains 1 80 - -
Ahy9g0999 89 ProSiteProfiles PB1 domain profile. 1 84 IPR000270 GO:0005515
Ahy9g0999 89 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 85 IPR003311 GO:0005634|GO:0006355
Ahy9g0999 89 Pfam AUX/IAA family 1 81 IPR033389 -
Ahy9g0999 89 Gene3D - 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0999 Ahy-Chr9 19722489 19746617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0999 1 79 B3 DNA Binding Superfamily AT1G59750 32.911 2.14e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy9g0999 AUX_IAA 3.10E-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0999 K14484 - gmx:100784866 129.413