Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0980 ATGGCAAACGGCAAAGTCGTTGTTTCTGCAGTTTCTATCATCCTTGTAGTTGGTGTTGTCATTGGCACCGTTGCAGTTGTTAGCAACAACAACAGCAGCCATGACCAATTGAAATCCCACAACAAGGCAGTGGAGAAGTTGTGCCAAAACGCAGATGACAAGAAACTTTGCTATGACGTCATTGGCAACGTCAATACCACTGACCCAAAGGATTACGTCTCAGAAGTGGTGAAGAGAACATTGGATACCGTCATCAAGGCATTCAACATGACCGATAGCCTCTCTGTGGAGCATGGCGAGAGTAATCCTGGCATGAAGATGGCCCTTGATGATTGCAAGGACTTGTTGCAATCAGCAACCCACGAACTCGAGGCCTCTATCAACCTTATCACTGACAACAATTTCGCAAATGTTTACCAGAGTTCCGCTGAACTCAAGAATTGGTTGGGTGCCGTTATTGCCTACCAGCAATCCTGCATGGACGGCTTTGACACCGACGGTGAAAAGAAAGTCAAAACCGAGTTGCAATCTGACAGCTTGGATAGCGTTGGCCAGCTCACTGCGCTTGCTCTTGATGTTGTTTCCGGATTGTCCCACTTCCTTAATGGTCTTGGTTTGAACTTGAACCTCAAACCTGCTTCTAGAAAGCTCCTTGAGGTGGATCATGAGGGATACCCCACTTGGTTATCCGCCGCAGATCGTAAACTCTTGCAAGACGTCAATAATGTCAGACCTAATGTTGTTGTTGCCAAGGACGGTAGTGGCCAATTTAAGACCGTTTTGGAGGCTATTAACTCTTACCCTAAGAACTACACAGGTAGATACATTATCTACGTTAAGGCTGGCGTTTATGATGAATACATTACCGTTGACAAGAAGTTCAAGAACTTGTTTATCTATGGCGATGGAAATACAAAGACCATCATCACTGGTCGCAAGAACTTCCATGAGGGTACTAAGACCATGAGAACATCCACATTCTCCACCAATGCTGATGATTTCATTGCCAAGTCAATTGCATTCGAGAATACCGCTGGTGCTGAAGGTCACCAAGCAGTGGCACTCCGCGTGCAGGGAGATCGCTCAGCCTTCTTTGATTGCGCAATGCGTGGTTACCAAGATACACTTTATGCCCACGCCCATCGTCAGTTCTACCGCAACTGCGAAATCTCTGGTACCATTGACTTCATCTTCGGCTATGGCACCACCTTGATCCAAAACTCTAGGATCATTGTGAGGAAGCCCATGTCAAACCAGCAGAACATTGTGGTCGCTGATGGAACTGACCAGAAGAACATGCCTACTGGTATTGTCCTCCAAAATTGTGAGATCATGGCTGATTCCACCCTCTACCCAGACAGGTTGACAGTGAGGACATTCTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAATACCATTGGTGATTTGATCCAGCCACAAGGTTACATCCCATGGAACCCACCAACTGAGGCTAACACTGACAATTGTTACTTTGTTGAGTATGGAAACACTGGAGCTGGTGCCAATGCCGGAGCCAGGGCCCCATTTGCAAAAGGCATTATTAGTAAGGATGAGGCTTCTCAATTTCTTGCTGAGCGATGGATCCAAGCTAGCACTTGGGTCCCTGCCACTGGCATTACATACGATGCTGGCTTCACCAAGGCTTAA 1683 0.4694 MANGKVVVSAVSIILVVGVVIGTVAVVSNNNSSHDQLKSHNKAVEKLCQNADDKKLCYDVIGNVNTTDPKDYVSEVVKRTLDTVIKAFNMTDSLSVEHGESNPGMKMALDDCKDLLQSATHELEASINLITDNNFANVYQSSAELKNWLGAVIAYQQSCMDGFDTDGEKKVKTELQSDSLDSVGQLTALALDVVSGLSHFLNGLGLNLNLKPASRKLLEVDHEGYPTWLSAADRKLLQDVNNVRPNVVVAKDGSGQFKTVLEAINSYPKNYTGRYIIYVKAGVYDEYITVDKKFKNLFIYGDGNTKTIITGRKNFHEGTKTMRTSTFSTNADDFIAKSIAFENTAGAEGHQAVALRVQGDRSAFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSRIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMADSTLYPDRLTVRTFLARPWKAFSRAVFIENTIGDLIQPQGYIPWNPPTEANTDNCYFVEYGNTGAGANAGARAPFAKGIISKDEASQFLAERWIQASTWVPATGITYDAGFTKA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0980 560 Pfam Plant invertase/pectin methylesterase inhibitor 43 192 IPR006501 GO:0004857
Ahy9g0980 560 SUPERFAMILY Pectin lyase-like 244 555 IPR011050 -
Ahy9g0980 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 179 IPR006501 GO:0004857
Ahy9g0980 560 SMART PMEI_2 39 193 IPR006501 GO:0004857
Ahy9g0980 560 CDD PMEI-like_3 47 198 - -
Ahy9g0980 560 Gene3D - 240 557 IPR012334 -
Ahy9g0980 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 198 IPR035513 -
Ahy9g0980 560 PANTHER PECTINESTERASE 5 557 - -
Ahy9g0980 560 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Ahy9g0980 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 194 IPR035513 -
Ahy9g0980 560 PANTHER PECTINESTERASE 5 557 - -
Ahy9g0980 560 Pfam Pectinesterase 246 542 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0980 Ahy-Chr9 19095274 19097387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0980 4 557 Carbohydrate Esterase AT2G47030 39.328 9.27e-133 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0980 K01051 - gmx:100808559 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1248 19 24593938 24596008 Ahy9g0980 9 19095274 19097387 hybridization