Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0979 ATGGCCCTCGAGGACTGTAGAGACCTGCTCCAATTCGCCATTGGGGAGTTACAAGCAACAAAAACAGTCCTTCAGGACAACACAATAAATCATGTGCATGATCGCGTCGCCGAGCTCAAGAATTGGTTAGGGGCTGTTTTCGCCTTCCAACAATTGTGCCTGGACGGGTTCCACACCCACCGCGAGAAGCAGGTTCGGTCGCAGTTGCAAACCGGAAGCTTGGATCACGTTGGGAAGGTTACGGCGTTGGCTCTTGACGTTGTGTCTCGGATTGCACATGTGCTGTCAAATTTTGACTTACACCTTATCGTTAAGCCTTCTTCACGGCGTTTAATTGAGGTTGATCAAGATGGTTACCCGGCTTGGTTCGGCGTTACGGATCGGAAGCTCTTGGGTGACGTCAGCAAGGGAGGTTCCATTGCGCCCAATGCAGTTGTTGCTAAAGATGGGAGCGGGCAATTTAAGACTGTTTTGGATGCCATTAATGCGTACCCTAAAAACAATAAGGGGAGATATGTTATCTATGTTAAGGCTGGCATATATGATGAGTATATTACTGTGGATAAGAACAAGAAAAATATTTTGATGTATGGAGATGGCCACACCAAAACTATTATTACTGGTAATAAAAATTTTGTTGATGGCTGGAAGACAATGAGAACTGCTACCTTTGCGACAGTTGCTGAAGATTTCATTGCGAAGTCAATTGCATTCGAGAACACAGCCGGTGCAAGCAAACATCAAGCAGTGGCACTTCGCGTGCAAGGCGACCGCTCAGCTTTCTTCGACTGCGCCATTCGTGGCTTCCAGGACACGCTATATGCTCACGCCCACCGCCAGTTCTATCGCAACTGTGAAATCTCCGGCACCGTCGACTTCATCTTCGGTTACTCCTCAACCATAGTCCAAAGCTCCAAGATCATCGTCCGAAAACCCGACCCAAACCAACAAAACATCGTGGTTGCAGATGGAACACCTCAGAAGAACATGCCCACAGGGGTAGTGCTACAAAACTGCGACATTTCACCAGAGGCTGAACTGGTTCCTATGAAACTAACGGTGAAGTCATATCTAGCGAGGCCATGGAAGGAGTATTCAAGGGCAATCTTCTTGGAGAACACAATTGGTGACTTGATTCAACCGGATGGGTATCTTCAGTGGTCAGGGAACATGTACCTAAACACTTGCTTCTTTGCTGAGTATGGAAACACCGGACCTGGGGCTAACGTTAATGCCAGAGTGAAGTGGGGTCGTGGGGTTCTTAATAAGAACGATGCTGCTCAGTACACTGCTGAGCACTGGATTCAAGCTAGTACATGGTTGCCAGCTACTAGTATACCCTTTGATCCTGCCTTCACTAGAGGATAA 1368 0.4766 MALEDCRDLLQFAIGELQATKTVLQDNTINHVHDRVAELKNWLGAVFAFQQLCLDGFHTHREKQVRSQLQTGSLDHVGKVTALALDVVSRIAHVLSNFDLHLIVKPSSRRLIEVDQDGYPAWFGVTDRKLLGDVSKGGSIAPNAVVAKDGSGQFKTVLDAINAYPKNNKGRYVIYVKAGIYDEYITVDKNKKNILMYGDGHTKTIITGNKNFVDGWKTMRTATFATVAEDFIAKSIAFENTAGASKHQAVALRVQGDRSAFFDCAIRGFQDTLYAHAHRQFYRNCEISGTVDFIFGYSSTIVQSSKIIVRKPDPNQQNIVVADGTPQKNMPTGVVLQNCDISPEAELVPMKLTVKSYLARPWKEYSRAIFLENTIGDLIQPDGYLQWSGNMYLNTCFFAEYGNTGPGANVNARVKWGRGVLNKNDAAQYTAEHWIQASTWLPATSIPFDPAFTRG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0979 455 SUPERFAMILY Pectin lyase-like 140 448 IPR011050 -
Ahy9g0979 455 CDD PMEI-like_3 1 92 - -
Ahy9g0979 455 ProSitePatterns Pectinesterase signature 2. 287 296 IPR033131 -
Ahy9g0979 455 ProSitePatterns Pectinesterase signature 1. 168 187 IPR018040 -
Ahy9g0979 455 Pfam Pectinesterase 143 437 IPR000070 GO:0030599|GO:0042545
Ahy9g0979 455 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 93 IPR035513 -
Ahy9g0979 455 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 89 IPR035513 -
Ahy9g0979 455 Pfam Plant invertase/pectin methylesterase inhibitor 2 85 IPR006501 GO:0004857
Ahy9g0979 455 PANTHER PECTINESTERASE 2 449 - -
Ahy9g0979 455 PANTHER PECTINESTERASE 2 449 - -
Ahy9g0979 455 Gene3D - 137 452 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0979 Ahy-Chr9 19078216 19081350 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0979 1 455 Carbohydrate Esterase AT3G05610 40.217 2.24e-121 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0979 K01051 - gmx:100820142 708.753