Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0975 ATGGCCGCAGGAAAAATCCTTGTGTCCGGTATTTCCCTCATCCTGGTTGTGGGTGTTGCCATCGGAGTAGTTGTCGTCGTGAACAACAAGAGTAGCGATCCTTCGTTAGCAGAACACCAAAGGACTGTGACTTCAATGTGCCAGGGGACCGATGACCCTCAGCTTTGCCAGGACACGCTCAAGGATGTTAAATCCTCAGGGTCGGATCCTAAGGCCTACATTGCCGCCTCGGTGGAAGCAACTACTAAGAGCGTGATTCAGGCTTTGAATATGAGTGATCGGCTCTCAGTGGATCATGGCAGTCAAAGCCCGGGCATCAAGATGGCCCTTGATGACTGTAAAGATTTGTTGGAATTTGCCCTAGATAGCCTGGAGGCATCAGCAAATTTGGTCCGAGATAACAACATTCAAGCTGTTCATGATCAGACGCCTGATTTCAGGAACTGGCTGAGTGCTGTTATCTCGTACCAACAATCTTGCATGGAAGGTTTTGACGACTCGCAAGACGGCGAGGCCAAAGTGAAAGAGCAGTTGCATACTCAAAGCTTGGACCAGATGGGGAAACTCACTGCGATCACGCTTGATATTGTCACCGATTTGTCTAAGATCCTTGAAACCTTTGGGTTGAAATTGGATTTGAAACCTGCCTCTCGCCGCCTCATGGAGGCAACCGATAACAATGTGGATGCAGAAGGGTTCCCGGGTTGGATGTCTGCAGCGGATAGGAAGCTCATGGGAAATGGCGGCGGCGGAGGTGGCAACGGTGCACCAAATGCTGTGGTTGCTCAAGATGGAAGTGGTCAATTTAGGACCATTAAGGATGCTATTAACTCATATCCTAATGGCTTCAAAGGAAGATACATTATCTATGTTAAGGCTGGGGTTTACAACGAGTATATTATCATTCCAAAGACTGCAGCGAATATTCTTATGTACGGTGATGGCCCAACAAGGACTATTGTCACTGGTCACAAGAACTTTGTAGATGGTGTCAAGACAATGCAGACTGCAACCTTCGCGAACACAGCGCCTGGGTTCATCGCGAAGTCAATGGCATTCGAAAACACCGCAGGTTGGGCAAAACACCAAGCAGTGGCGTTCCGAAACCAAGGAGACATGTCCGCTTTCTTCGACGTCGCGCTGCATGGTTACCAAGACACCCTCTACGTCCAAGCCAACCGTCAATTCTTCCGAAACTGCGAGATCTCCGGTACCATCGACTTCATCTTCGGCGCATCCGCCACCATAATCCAAAACTCCAGGATCATAGTTCGGAAGCCAGGTCCCAACCAATTCAACACCGTCACGGCAGACGGTACGGCGCAAAAGAACATGGCAACAGGGATCGTTATCCAGAACTGCGAGATCATGCCGGAGAGGGAACTCTTCCCCGACAGACTCTCAGTGAAATCGTACCTTGGTAGGCCATGGAAACAGTATGCAAAGACAGTGGTTATGGAGTCGAATTTGGGTGACCTTTTCTCACCTGATGGATGGGCTCCTTGGGCTGGATCCCAGTTTCTTAATACCTTGTACTATGCTGAGTTCAACAACGTTGGACCCAGTGCTAATGTTCAAGGAAGGGTTAAGTGGAAAGGTTACCACCCAAACATTGATAGGAACCAAGCTGCGGCATTCACTGTTGGACAGTTTCTCAAAGCGGGACCCACTGGTACTGCTGATGATTGGTTGAGGGCAACTGGCATTCCTTACGATGTTGGATTCACAAAATGA 1734 0.4919 MAAGKILVSGISLILVVGVAIGVVVVVNNKSSDPSLAEHQRTVTSMCQGTDDPQLCQDTLKDVKSSGSDPKAYIAASVEATTKSVIQALNMSDRLSVDHGSQSPGIKMALDDCKDLLEFALDSLEASANLVRDNNIQAVHDQTPDFRNWLSAVISYQQSCMEGFDDSQDGEAKVKEQLHTQSLDQMGKLTAITLDIVTDLSKILETFGLKLDLKPASRRLMEATDNNVDAEGFPGWMSAADRKLMGNGGGGGGNGAPNAVVAQDGSGQFRTIKDAINSYPNGFKGRYIIYVKAGVYNEYIIIPKTAANILMYGDGPTRTIVTGHKNFVDGVKTMQTATFANTAPGFIAKSMAFENTAGWAKHQAVAFRNQGDMSAFFDVALHGYQDTLYVQANRQFFRNCEISGTIDFIFGASATIIQNSRIIVRKPGPNQFNTVTADGTAQKNMATGIVIQNCEIMPERELFPDRLSVKSYLGRPWKQYAKTVVMESNLGDLFSPDGWAPWAGSQFLNTLYYAEFNNVGPSANVQGRVKWKGYHPNIDRNQAAAFTVGQFLKAGPTGTADDWLRATGIPYDVGFTK* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0975 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 201 IPR035513 -
Ahy9g0975 577 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 199 IPR006501 GO:0004857
Ahy9g0975 577 SUPERFAMILY Pectin lyase-like 256 571 IPR011050 -
Ahy9g0975 577 Pfam Pectinesterase 258 553 IPR000070 GO:0030599|GO:0042545
Ahy9g0975 577 Pfam Plant invertase/pectin methylesterase inhibitor 42 196 IPR006501 GO:0004857
Ahy9g0975 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
Ahy9g0975 577 SMART PMEI_2 38 196 IPR006501 GO:0004857
Ahy9g0975 577 CDD PMEI-like_3 45 202 - -
Ahy9g0975 577 Gene3D - 253 575 IPR012334 -
Ahy9g0975 577 PANTHER PECTINESTERASE 4 575 - -
Ahy9g0975 577 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Ahy9g0975 577 PANTHER PECTINESTERASE 4 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0975 Ahy-Chr9 19050594 19053111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0975 4 575 Carbohydrate Esterase AT2G47030 39.209 1.58e-131 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0975 K01051 - gmx:100789650 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1247 19 24575018 24577138 Ahy9g0975 9 19050594 19053111 hybridization