Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0951 ATGGCTGTCAAAACCCGTTTCCAAGTGATTATGATGATGATCACTGTGTTCTTTCTTTCATCTTTATGCATCACTTTGGGAACCAAATTAAAATTTGTTGGAGGTAGTGGTCCAGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAAACGGTGCTGGTGACTTCAAGACCGTTACAGAAGCTGTTAATAGCATCCCTCAATGGAATAATAGAAGATTCATTCTGTACATTGCACCAGGGGATGCTAGTGATCCACCAACAATTACAGGGAATGATACAGCTTCTATCGTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCCGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACACAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACACTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTCGGCTCTGGCAGGTCCCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGGTGGCTTCCATCACAGCTCAAAAGCGAACAAATTCATCAATGGAGAGTGGATTTTCATTCAAAAACTGCACAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCATGGGGCGATTATTCAACGGTTGTTTTCTCTTACACCTTCATGGACAAAGTTGTCCTTTCACAAGGATGGAGTGACTGGGGTGATCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTTCCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCACTGGAATTCAATTTATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 993 0.432 MAVKTRFQVIMMMITVFFLSSLCITLGTKLKFVGGSGPDLRLRDAESNKVRITVSQNGAGDFKTVTEAVNSIPQWNNRRFILYIAPGDASDPPTITGNDTASIVGRNGKPIGTFQSATVAVDANYFLAINIKFENTAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKVASITAQKRTNSSMESGFSFKNCTVTGSGQVFLGRAWGDYSTVVFSYTFMDKVVLSQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFTGIQFIEGDSWLISP* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0951 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 328 - -
Ahy9g0951 330 PANTHER PECTINESTERASE 37 328 - -
Ahy9g0951 330 Pfam Pectinesterase 52 324 IPR000070 GO:0030599|GO:0042545
Ahy9g0951 330 ProSitePatterns Pectinesterase signature 2. 186 195 IPR033131 -
Ahy9g0951 330 SUPERFAMILY Pectin lyase-like 50 327 IPR011050 -
Ahy9g0951 330 Gene3D - 46 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0951 Ahy-Chr9 18319103 18327012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0951 52 327 Carbohydrate Esterase AT5G47500 45.118 3.10e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0951 K01051 - cit:102614801 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1217 19 23152402 23157424 Ahy9g0951 9 18319103 18327012 hybridization