Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0943 ATGTATATGGAGAAGGATAACATGGATTTGAAGAAGACTGAGGATGCTGTTGCTTTTGGATCCTCAAACGGTTATTATAATAATCCGTTGTTATTGTCGAGTGCGTTTGATTTCAGCTGTGAAGTGGAGAAAAGCTCGTTTATGGAGTTGCTGGGAGTGCAGGACTACTATAATAATAGTGGTGCTGTGCTTGATTTGCCACAGTTATCAAAAGCTACAGTTCTTCCTTTTACCACGGTTAACGCTTCTTGTGACGATACTGCTAAAGAGTGTTCTGAAGTGTTGAACCAGAAGCACCAACCTGCAACTCCGAATTCGTCTTCGATTTCGTCCGCGTCGAGCGAAGCTGTCAACGATGAACACAATAAAACTGTAGAACAAGATGATCATGATGATGATAGTGAAGAAGATGAAGGAGAAGAAGAGCAGCAGAAAAAGACTAAGAAAGAGTTGAAGGCAAAGAAGACAAAGCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACTAAAAGCGAGGTCGATCATCTGGAAGACGGTTACAGATGGAGAAAGTACGGTCAAAAGGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAGCGTGTGGAGCGGTCATTTACTGATCCAAGCGTTGTGGTAACTACCTATGAAGGCCAACACATACATCCAAGCCCAGTTATGCCTCGTTCAGCCATTGCCGGCGTCGGATCTCCGATGATACCGCCGGGTGTCTCCACTGCCAACTTGGGTTCTCCCTTGCCTGGAAACTACATGTCGCACTATCACCAGCATCGCCACCACCACCAACAACTACTAGTGAATACATTGTTCTCCTTGGGCATCCCTTACAACAATAGCAACAATATTGATAACTCTTCTTTTTCTCAAGACAATGGGCTTCTTCAAGATATTGTTCCTTCACACATGTTGAAAGAGAAGTATAGGAGAGACATAGTTGAGAATTGA 1002 0.4381 MYMEKDNMDLKKTEDAVAFGSSNGYYNNPLLLSSAFDFSCEVEKSSFMELLGVQDYYNNSGAVLDLPQLSKATVLPFTTVNASCDDTAKECSEVLNQKHQPATPNSSSISSASSEAVNDEHNKTVEQDDHDDDSEEDEGEEEQQKKTKKELKAKKTKQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHPSPVMPRSAIAGVGSPMIPPGVSTANLGSPLPGNYMSHYHQHRHHHQQLLVNTLFSLGIPYNNSNNIDNSSFSQDNGLLQDIVPSHMLKEKYRRDIVEN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0943 333 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy9g0943 333 PANTHER WRKY TRANSCRIPTION FACTOR 12 314 - -
Ahy9g0943 333 PIRSF WRKY_txn_fact_IIc 3 326 IPR017396 GO:0003700
Ahy9g0943 333 Coils Coil 134 161 - -
Ahy9g0943 333 SUPERFAMILY WRKY DNA-binding domain 169 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy9g0943 333 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy9g0943 333 Gene3D WRKY domain 162 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy9g0943 333 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy9g0943 333 MobiDBLite consensus disorder prediction 97 166 - -
Ahy9g0943 333 MobiDBLite consensus disorder prediction 97 118 - -
Ahy9g0943 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 314 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0943 Ahy-Chr9 18007304 18010586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0943 101 325 WRKY Transcription Factor Family AT2G47260 55.602 1.58e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy9g0943 WRKY 8.00E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0943 - - aprc:113872234 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1205 19 22836286 22838798 Ahy9g0943 9 18007304 18010586 hybridization
Ahy16g0731 16 13336532 13338618 Ahy9g0943 9 18007304 18010586 PCT
Ahy6g0604 6 7454642 7456641 Ahy9g0943 9 18007304 18010586 PCT
Ahy9g0943 9 18007304 18010586 Ahy16g0731 16 13336532 13338618 PCT
Ahy9g0943 9 18007304 18010586 Ahy6g0604 6 7454642 7456641 PCT