Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0888 ATGTACGGAATGATGACCACGCATGCTTTGGGAACCAATGTGAATGTCCACGATCACGTTGAAACGACCGCCAAGTCGACGTTTCACGGCGTTCCTGATGCGGTGGGAGCGTCATTGCTTCCCCGGAGCTCGAGCTTTAAGAACATTTTTTTGGCGGAGAACTGGGCGGAGCTGCCACTCAAGGAGGACGACACGGACGACATGGTCATCTACGGTGCATTGCAGGAGGCTGCCACCACCGGGTGGTGCCCCGCCAGAGAGAATGGCGGCGTTGGTAGCGCGTCGGAGAAATTGGAAAATGAGGGCAAGGGCAATGGCATTGTGGAAGCGCGTGAGGTTGACGCGCTGGCTAAGGGCGGTAGAGGGTATAGAGGGGTTCGGAGGCGGCCGTGGGGAAAGTACGCGGCTGAGATAAGAGATCCGAAGAGGAACGGTGTGAGAGTGTGGCTTGGGACTTATGAGACGGCTGAGGATGCGGCTTTGGCTTATGATCGAGCCGCGTTCAAGATGCGTGGCTCAAAAGCCAAGCTGAATTTTCCTCACTTGATTGGGTCGGACGAAGTTGGTGAGCCGGTGAGAGTTACACTAAAACGGCGCTCACCCGAGACACCCTTGCCGTGCCCTTCTTACTCTTTCGATTACTGTAACAATGCAGAGAAGCGGAGCAAAATTGTTGGTCAGGGTGCAGTGGCGGCCACGGCTTTAGAGCCCGCTAATAAAAAAAGTATGTGGCAATTTTCCAGTCGGTGA 750 0.5507 MYGMMTTHALGTNVNVHDHVETTAKSTFHGVPDAVGASLLPRSSSFKNIFLAENWAELPLKEDDTDDMVIYGALQEAATTGWCPARENGGVGSASEKLENEGKGNGIVEAREVDALAKGGRGYRGVRRRPWGKYAAEIRDPKRNGVRVWLGTYETAEDAALAYDRAAFKMRGSKAKLNFPHLIGSDEVGEPVRVTLKRRSPETPLPCPSYSFDYCNNAEKRSKIVGQGAVAATALEPANKKSMWQFSSR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0888 249 PRINTS Ethylene responsive element binding protein signature 162 182 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 ProSiteProfiles AP2/ERF domain profile. 122 180 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 CDD AP2 130 182 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 PANTHER BNAC04G53270D PROTEIN 30 221 - -
Ahy9g0888 249 Pfam AP2 domain 122 172 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 SMART rav1_2 122 186 IPR001471 GO:0003700|GO:0006355
Ahy9g0888 249 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Ahy9g0888 249 PANTHER DNA-BINDING DOMAIN 30 221 IPR044808 GO:0003700|GO:0009873
Ahy9g0888 249 SUPERFAMILY DNA-binding domain 122 181 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0888 Ahy-Chr9 15872255 15873512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0888 26 236 AP2-EREBP Transcription Factor Family AT2G44840 50.237 7.90e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy9g0888 AP2 1.70E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0888 K09286 - gmx:100793366 236.113