LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g0845	ATGGATTGTGTGAAGATGTTGAAGAACAAAGGATACGGCAAAGTAGAAGAAGAGAATCAGAGTCACTACGTCGAAAATCAGCACAAACATTATTCCAAATTCCTAATCGCTACTCTCTCCACCGTCGCACTCTTCTTTCTCACTCTCCTCTTCGTTCTCGCCTTAGTCCGCCATGAGCCCGCCGACTCAGCCACCGAGTCCATCCGAGTCGCCTGCAACGTAACTCGTTATCCCAACTCCTGCTTCACCAGCTTAACCTCCTTCCTCAGCAACACCACTACCACGAAAGCCATGGATCCACAAGCTATCTTGTCCCTTTCACTCCGAGTCTCCATCCACGAACTCTCTAATCTCGCCTCCTCCTCCTCCCTCTCCGTTGACTGCAGGGAGCTCGTGGATGACGCCGTCTCCCGCCTCAACGACTCCCTCTCGAAGGTGGAAGCGGCACCAAAGGGGCTGACGGAGGCGGAGATGGCGGACGCGCGCACGTGGGTGAGCGCCGCCTTGACGGACCAGCAGACGTGCCTGGATGGACTGGAGGAGATTGGGTCCTCCAACGCTTCGGAGGTGAAGACCAAGATTGAGAGGTGCGGTGAGTACACCAGCAATACCTTGGCCATTCTTGCCAATTTTAAAATCTTAGCTTGA	648	0.5417	MDCVKMLKNKGYGKVEEENQSHYVENQHKHYSKFLIATLSTVALFFLTLLFVLALVRHEPADSATESIRVACNVTRYPNSCFTSLTSFLSNTTTTKAMDPQAILSLSLRVSIHELSNLASSSSLSVDCRELVDDAVSRLNDSLSKVEAAPKGLTEAEMADARTWVSAALTDQQTCLDGLEEIGSSNASEVKTKIERCGEYTSNTLAILANFKILA*	216

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g0845	215	PANTHER	PECTINESTERASE 1-LIKE	4	209	-	-
	Ahy9g0845	215	Gene3D	Invertase/pectin methylesterase inhibitor family protein	63	211	IPR035513	-
	Ahy9g0845	215	PANTHER	PECTINESTERASE	4	209	-	-
	Ahy9g0845	215	CDD	PMEI-like_3	71	211	-	-
	Ahy9g0845	215	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	67	210	IPR035513	-
	Ahy9g0845	215	Pfam	Plant invertase/pectin methylesterase inhibitor	67	207	IPR006501	GO:0004857
	Ahy9g0845	215	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	44	209	IPR006501	GO:0004857
	Ahy9g0845	215	SMART	PMEI_2	63	207	IPR006501	GO:0004857

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g0845	Ahy-Chr9	14213582	14215080	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g0845	1	215	Carbohydrate Esterase	AT1G53840	32.530	9.69e-25	99.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g0845	-		-	aip:107619071	360.533

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