Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0842 ATGGCGGGGATCTTGGCCACCGCTTTTATTCTTGCAAGTTACTACTATAGCCGCCGCAGAGAGAACCCCAACGATGATGAAGCCGAAACTTGGTGGCATCAATACTACGTCTCAACAAGCACCACAACCAGAATTGGCGGCGACTTAGATGAGGATGCGTTAAAGTGGATGGCAGTGTGGAAGTACAAGAGTGGTAAAAGCAGAGCCGATAGCTGTTGTGTTTGTTTGAATGAATTTGAAGAGGGAGACAGTGTTAGGGCTTTGCCGAACTGCACCCATGCTTTTCATCCTCTTTGCATTCAGACATGGCTCAAATCTCACTCCACCTGCCCTCTTTGTCGTCGTGCCACTGCCCCCGTAGCTCCCCCATACGCGGTGGTGGTGGACCTCCCTCTCCCTGCAGGAACTGACACTACTACCGAAGAAGAAGAAGAAGAAGAAGAAAGCATACATAATAACGGTAATGTTGATAACAACAGCCTGCACAGAATAATTGATATAATAAGAGATGATCAACTTCAAGTAGGGGGTCATGATGATGATCAGTCCATTAATAAAACTATCAGGAAGTCAGTTTCTATAGACCCCCACTCATTCTCCTCGTCGTCTTCGTCATCAAAGAGCAGATACAGATCTCGTGGAGATCAAAGAAGCAGTAAGTCCTGCAGCTATAAGAGAAAACATGTATTGCATTCTGTATTCAGGGGCCCAATTGCTATGAAAAGGTCATTTTCCGGTAGTGCAAGAGCTAGTCACACAGCAAGGCACTCATTATCATAA 780 0.459 MAGILATAFILASYYYSRRRENPNDDEAETWWHQYYVSTSTTTRIGGDLDEDALKWMAVWKYKSGKSRADSCCVCLNEFEEGDSVRALPNCTHAFHPLCIQTWLKSHSTCPLCRRATAPVAPPYAVVVDLPLPAGTDTTTEEEEEEEESIHNNGNVDNNSLHRIIDIIRDDQLQVGGHDDDQSINKTIRKSVSIDPHSFSSSSSSSKSRYRSRGDQRSSKSCSYKRKHVLHSVFRGPIAMKRSFSGSARASHTARHSLS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0842 259 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 2 247 - -
Ahy9g0842 259 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 247 IPR044675 -
Ahy9g0842 259 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Ahy9g0842 259 Pfam Ring finger domain 70 114 IPR001841 -
Ahy9g0842 259 MobiDBLite consensus disorder prediction 188 224 - -
Ahy9g0842 259 SUPERFAMILY RING/U-box 71 120 - -
Ahy9g0842 259 MobiDBLite consensus disorder prediction 188 209 - -
Ahy9g0842 259 CDD RING-H2_PA-TM-RING 72 114 - -
Ahy9g0842 259 SMART ring_2 72 113 IPR001841 -
Ahy9g0842 259 MobiDBLite consensus disorder prediction 134 157 - -
Ahy9g0842 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 119 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0842 Ahy-Chr9 14154178 14154957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0842 1 127 C3H Transcription Factor Family AT5G17600 44.526 1.49e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0842 - - ahf:112712917 459.144