Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0790 ATGGACCATTTCGTGAGTTCATTGTTTTTGCAAGATGAAAATGTGCGTGCCGACAATGATCCTTTGGCATGGGAGGACATTGAGGGTTGTCGTGTTTCGGAAAATTATGCCGAGGAAGTGCAGGGTGTTGATAGTAATGTCGATAAATTTTTTAATGACACCTTCTATGACAACTGGGATGAAAGAGCATTTGACGGTATTGATGAGCTTGGGTATATGAATCTGAAAGAAATAACTGCAAGTGAGGTTAGGTTGTTACATTTTCGGGATCAGACTGTTGCATTTTCTTTCTACCAATTGTATTCAAAGATGAACGGTTTTGCTGTTAGAAAGAATAGGATTAGAAGGAATGTCAAAAACGAGGTGACACAACAACAATTTATTTGCTTTTGGGACGGGTTTAGAGATACGGGGCCTGAGAATGATTCCCATCGACGCAAATGCGAGCCAAAGCCTGAGCCTAGATGCGGATGTCTGGCTGAAATGCGTGTTCATGTACATGTCGAAAGTGGTAGATGGATCACTTCGTACTTTCAGGATGAGCACAACCATGACATGCTTGATGATAGATTGATGATGCCATTCGATGCGACTTATTGTAAGAACAGGTACATGTGCCCGTTGGTTGTATTTTCTAGGGTTAATCATCATAACCAAACCATTGTGTTTGCCGCAATGCTTGTTGCGAATGAGAAGGAGGAGACATATACATGGTTGTTAAAACAATTTCTTGAGGCTATGAAGGGCAAAGCACCAGGTTGTGTAATAACTGACGGGGACAATGCCATGAAAAAAGCAATCGAATCTGTGTTTCCGAGTGCTTACTATCGGTTATGTGCATGGCATTTACTTAGGAATGCAACCTCTAATCTTAGCAATCCGACGTTCACATCTGAATTTAAGAAGTGCATGCTTTTTTATTATGAGATTTCAGAGTTCGAAGATTGGTGGGTCAAATTGGTTACGGAGCTTGGTCTTCAACATAATGAATGGGTTTGTGACTTGTATGCTAGGAGGAAAATGTGGGCAACTGCTTACATTCACGGGCATTTCTTTGGTGGGTTTCGAACAACATCAAGGTGTGAGAGATTGCATTCTATGCTCAGTAAATTCGTGCACTCTCGACATAACTTGAGAGGCTTTATTGAACAGATCTTGCGATGTATATGTCAAATGAGGTTAAGGGAAGCACAAAGTGAGTTGGCATCTGTTGTTGGGGATTTAGTGTTGCAAAGTCCACTACATGCATTGGAAAGATCTGCCGCCAACACACTGACAAGAGAGATTTTCATGTTATTCAGGCCAATGTTGACAAGAGCTTGTACGCTAAAGGTGTGTTCATGTACATTGACACCAAGTTGTGAGATTTATACACTATCCAAGTCAGGAAATCCTAATAAAGAATGGAACGTGTCTCACTATCAGGACAGATCAATATTTAAGTGCTCTTGCTTCAGGATGGAATCACTTGGCATACCTTGTGATCATATCGTGGCAGTTCTAGTACATCTTGATGCGAAAGAGATACCAAAGAGTCTTCTTATAGATCGATGGTCGAAAAATGCTCGGTTAAAAGTGTGGGAATTTATGGAAAATGGACCCTTTTGTTGGGAATCTTGA 1620 0.4093 MDHFVSSLFLQDENVRADNDPLAWEDIEGCRVSENYAEEVQGVDSNVDKFFNDTFYDNWDERAFDGIDELGYMNLKEITASEVRLLHFRDQTVAFSFYQLYSKMNGFAVRKNRIRRNVKNEVTQQQFICFWDGFRDTGPENDSHRRKCEPKPEPRCGCLAEMRVHVHVESGRWITSYFQDEHNHDMLDDRLMMPFDATYCKNRYMCPLVVFSRVNHHNQTIVFAAMLVANEKEETYTWLLKQFLEAMKGKAPGCVITDGDNAMKKAIESVFPSAYYRLCAWHLLRNATSNLSNPTFTSEFKKCMLFYYEISEFEDWWVKLVTELGLQHNEWVCDLYARRKMWATAYIHGHFFGGFRTTSRCERLHSMLSKFVHSRHNLRGFIEQILRCICQMRLREAQSELASVVGDLVLQSPLHALERSAANTLTREIFMLFRPMLTRACTLKVCSCTLTPSCEIYTLSKSGNPNKEWNVSHYQDRSIFKCSCFRMESLGIPCDHIVAVLVHLDAKEIPKSLLIDRWSKNARLKVWEFMENGPFCWES* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0790 539 Pfam MULE transposase domain 193 286 IPR018289 -
Ahy9g0790 539 SMART 26again6 480 507 IPR006564 GO:0008270
Ahy9g0790 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 195 526 IPR031052 GO:0006355
Ahy9g0790 539 ProSiteProfiles Zinc finger SWIM-type profile. 469 505 IPR007527 GO:0008270
Ahy9g0790 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 189 IPR031052 GO:0006355
Ahy9g0790 539 Pfam FAR1 DNA-binding domain 96 187 IPR004330 -
Ahy9g0790 539 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 87 189 - -
Ahy9g0790 539 Pfam SWIM zinc finger 482 504 IPR007527 GO:0008270
Ahy9g0790 539 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 195 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0790 Ahy-Chr9 12700518 12703950 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy9g0790 MULE 1.90E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0790 - - adu:107464713 1121.3