Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0784 ATGGGAAGGAGTCCTTGCTGTTCTAAGGAAGGTTTGAACAAAGGAGCATGGACTGCTATGGAAGACAAAATTCTCACAGACTACATTAAGATTCATGGTGAAGGAAAATGGAGACACTTACCCAAAAGAGCAGGGCTTAAGAGATGCGGAAAAAGTTGCAGGCTGAGATGGTTGAATTATCTAAGACCTGGCATTAAAAGAGGAAATATTACTCACGATGAAGAAGAGCTTATAATCCGCCTTCACAACCTTCTCGGAAACAGGTGGTCCTTGATTGCTGGGAGGCTTCCAGGACGAACAGACAATGAAATCAAGAACTATTGGAATACCAACATTGGAAGAAAGCTTCAAAATGGTACCCAAAATTGCTCATCATCAAACTTGCTCCAACTGGATCCGAACCCGAATCCGAAAACCCGAGAATGGCCATGCCCTAATAATTACCTACAAAATAATATTGGTTCTTGTTTGGTCCAGACTAAAGCCACAAGATGGCCTAATAATAATAAGGTCATACTCACCAAAGAAATTATCACAAAACAAAATAATGAAGGCATGGTTCATAATCATCACATTAATAATAATGTTAATGCCACGGATTACAAGATGAAAGGTTCATCGTCTTCATCCCCGGTGTTTCCGGTGTCACCATCTTCAGAGAGTAACACGAATATCAACGACGACAACAACAATAATAACAACAACAAAAACATCGAGGAAGCGTTGGATTTCATGGCGGATTTTCAAACGGAGGGAAATAATCTTTATTCGGAGCTTCTCAAGATGGACTTTGCAGAAGCATCATCATGTTTGGAAAATAACATGTTGGAAGGAAGTGAAATGATTATGAATGAGCTAGGTTTCGGCTGA 870 0.4 MGRSPCCSKEGLNKGAWTAMEDKILTDYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITHDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGTQNCSSSNLLQLDPNPNPKTREWPCPNNYLQNNIGSCLVQTKATRWPNNNKVILTKEIITKQNNEGMVHNHHINNNVNATDYKMKGSSSSSPVFPVSPSSESNTNINDDNNNNNNNKNIEEALDFMADFQTEGNNLYSELLKMDFAEASSCLENNMLEGSEMIMNELGFG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0784 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy9g0784 289 Gene3D - 14 66 - -
Ahy9g0784 289 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy9g0784 289 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Ahy9g0784 289 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy9g0784 289 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy9g0784 289 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy9g0784 289 CDD SANT 16 61 IPR001005 -
Ahy9g0784 289 SMART sant 13 63 IPR001005 -
Ahy9g0784 289 SMART sant 66 114 IPR001005 -
Ahy9g0784 289 Gene3D - 69 131 - -
Ahy9g0784 289 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 268 - -
Ahy9g0784 289 CDD SANT 71 112 IPR001005 -
Ahy9g0784 289 MobiDBLite consensus disorder prediction 203 236 - -
Ahy9g0784 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy9g0784 289 PANTHER TRANSCRIPTION FACTOR TT2 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0784 Ahy-Chr9 12570047 12574339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0784 1 116 MYB Transcription Factor Family AT2G16720 77.586 4.24e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g0784 Myb_DNA-binding 9.90E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0784 K09422 - gmx:100809225 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1025 19 16573488 16578245 Ahy9g0784 9 12570047 12574339 hybridization