Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0778 ATGTCAGGGCAGCGAGAAACGCTAGCCGGATTAACACTTGACGACGTCTTAGCAAAGCAGAAAGCATTTTACCACTCACAATCCAACACCAAAACCCTCCTTGATATCCTCAAAGACGACGTCTCCTTCAACAAGAACCGCAAGTCTTGGAAAGCATTCAAGGACACGCTTCTGCTAAAGCGTTACGGCTCTGCTTGGACTCGAATTCCCACTTCCGACATTCCCATCTCATTCTGCCGCCGCCCCTCTCTCAAACACTTTCAATCCATGGCTGACAACACCGACAACGTTGATGAAGTCCCAGCCTTACCTCCCCCTTCACTCGCACCCAAGGCCACCTTCTCCCGCCGGAGTTCCACCCGCTACAGCTCCCCGTCCGAGGTCACATTCACCGCTGGCGATCCCACGGAGCCGGCCCCTGCCGGCAGCGCGCTACTCCGGCCTCAGCTTTCGCGACGGAACTCCTCCGGCATGGTGTCGGAGCCATTCCGGAAGGGCCGCGTGGTGACGTTCCGGGACAACTTGGACGACGAGGAGCAGGACGAGGAGGACGGGTCACGTGCGGATGGCAGCAGGACACTATCAGCAAGAGAGGCGGTTGCAGCACAGGAGGCGGCGGAGGCGGCTGCTGCAGGGGAGGTTGTTGGAGAGGGAGAGGAAGACGAGGCGACGCAGCCAGTGATGATGTCACTGATGGACTTGTTGGAGGAGACTGACAGAGAGATGGGGCTTGAAGGATCGAGGTACATTCTGAGTGATGAAGAGGATTTTGACGAGGATGAGGAAGATGAGGATGGTGATGGTGATGACTTGGAATACACGTGCTCAGTGTGCATGGTGAGGCATAAGGCTAATGCTATCAGCCGCTGTGGCCACTCTTACTGCAGGATGTGCTCTAGGGAACTCATGGCTGGCAAAGGCAACTGCCCTCTCTGCAACAATTTCGTTGTTGAGATTCTTGACATCTTTTGA 972 0.5586 MSGQRETLAGLTLDDVLAKQKAFYHSQSNTKTLLDILKDDVSFNKNRKSWKAFKDTLLLKRYGSAWTRIPTSDIPISFCRRPSLKHFQSMADNTDNVDEVPALPPPSLAPKATFSRRSSTRYSSPSEVTFTAGDPTEPAPAGSALLRPQLSRRNSSGMVSEPFRKGRVVTFRDNLDDEEQDEEDGSRADGSRTLSAREAVAAQEAAEAAAAGEVVGEGEEDEATQPVMMSLMDLLEETDREMGLEGSRYILSDEEDFDEDEEDEDGDGDDLEYTCSVCMVRHKANAISRCGHSYCRMCSRELMAGKGNCPLCNNFVVEILDIF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0778 323 CDD RING-HC 275 312 - -
Ahy9g0778 323 MobiDBLite consensus disorder prediction 95 225 - -
Ahy9g0778 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
Ahy9g0778 323 MobiDBLite consensus disorder prediction 112 131 - -
Ahy9g0778 323 ProSiteProfiles Zinc finger RING-type profile. 275 313 IPR001841 -
Ahy9g0778 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 323 IPR013083 -
Ahy9g0778 323 SUPERFAMILY RING/U-box 274 319 - -
Ahy9g0778 323 SMART ring_2 275 312 IPR001841 -
Ahy9g0778 323 Pfam Zinc finger, C3HC4 type (RING finger) 273 315 - -
Ahy9g0778 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0778 Ahy-Chr9 12408647 12409976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0778 7 323 C3H Transcription Factor Family AT3G07120 33.880 9.83e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0778 - - lang:109359938 274.248