Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0737 ATGATGGGAATAGAGGAAGTTGAGGATACTTCGAGGACTCTGCTGCAGGACAGGTGTAACGATGCAGATAAAGAGCAACAAAGGATAATGGATGAGTTGGAACTGGTTGTGAATGAAACCCAAAATATCATTTGTGATAGTGGTTTAATCTCTTTGAGTGCTGGGTCAGGTGAGGAACAGAATGGCAGCAATGCAGCTGAGATGCAAGTACAAGGCTCAACGGATTCTCTTCCAAATTCTAAAGAAGCTGAAGTTGAGAAGGTAGAGCTGGATTATGAAGATGAAAGGCTGCTGGATTATGATAATTTGGAAGATAAATGTAAAATGAAAAATGAAAGAAATTTAGAAAAGTCAACTTGTGTAAACAATGCATCAATTTCTTCAAATATTCAGATTGAAAATGAGGACATAGAAGAGGGAGAGCTTGTTGGAGACCTTGGAGTGGATTGTAATTCATTTGACATGCCTACTGCAGATTCCTTTATTCCTCAAACAAACATTGATGAGGTTCAGAACCCCGAAAGTATTAATATGGGGAATACAGAAAAAGAAGGTTTAGGCAAAGAAATAGGTAGTAAACTGGTTACTGACGTGCCAATAAATTATGTTCAAAATCCAGTCTTGCACAAATCCATATTGGAAGAGGACTCTGACCAAGATCATGGAAACCCTGCTGCATCAGAGATGGTTGATGTCAGCTGTAAAAAAAAGCGTGGCCCTGGTTCTGCAGAAAAGAAAGCGAAAAAGAAGAAAAAAGAGCGGAAAAAACGGGCAAAAAAGAACAAACAACTTGGTGTTAAAAGGTTGAAGTTGTCTCTAGTACAACAGAAACCAAAAACCATCTCTTATTGTCGCCATTTTCTTGTTGGAAGATGCTATGAGGGTGACAAGTGCCATTTTTCACATGATACAGTGCCTTCTACCAAATCAAAGCCATGCTCCTTTTTCGCTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGATCATCAACTCTCCAAGTATCCTTGTGTTAACTTTGTGTCCGGAGGTTTTTGTGTCAGAGGTGATGCATGCTTGTTTTCGCACCAGTCACCAGCCAAGGAAGATTTTGCTCCAGCTTCAAGTGTGCACAACCCAGGAATGAAATCTCCACACTTTTCAGGAAACACAAATTCCAACATGCCACCTAACATTCTTGGCTGTAGTTCTATCCAACAAAACCATTTGATCAATCCTCCAAGAGTTCATTCTGATATCAATTCGGAACATAAAGCGACAAACACTGTACAGAAACAGCTTAAGCTTGCATCTAAAGGAGTTAGCTTCGTCGATGTTGCAAAGCTATCGTTGCCTTCTCCTACTACGCCAAAGGAAGGCACGACCAAAGTTGGCTCATCCTCTTCTGACCAACGTACATCTGGAACAAATCAAACCTTGGTTGAAATTCCAAAGAAATTGCCAGCTAGGATTCCAAAGGGAATTAAATTTCTTGCTTTTGGGAAAGATGCTGTGTGCAGTTTTAAGAGTTCTGTCAACTCCCTTGTAATTGGGGAAAATAGTATTGATTTTCTCCAGAATATAAGTTTCAGTTTGCTTGATCATACTAGTTCATCCTTAAAAGATGCAACAAAAGGAAGGGTACCACCGACTGATTTAGTCTCCAGTGAGATTTCTGGTAAAAATCAATCCGTGGCAGAAAGTATAAAATCGAGTTTTCCAGGAAAAGCTTCAATGAATGATGCTTCAACTGGTTTACAAGGTAGCTCTCATGTGGATGACAACGGAAGCAAACCAGTCCAAGAGGCAAGTGGGGCATCTGATTCTTTTCAAATTTCCGCAGCAACACCGTCGCCATTTATGCGTCTGGGTTCTCCTTCATCTTCAGAACAGCTACTATCTAGAAAGGAGCTCTTGTCGACTGTATTGTCATTTGCAGCAGAGCATGAATCAGTTATCAAGATGAAAGATTCTGCTGGCACTTCAACTGCATAA 1977 0.4057 MMGIEEVEDTSRTLLQDRCNDADKEQQRIMDELELVVNETQNIICDSGLISLSAGSGEEQNGSNAAEMQVQGSTDSLPNSKEAEVEKVELDYEDERLLDYDNLEDKCKMKNERNLEKSTCVNNASISSNIQIENEDIEEGELVGDLGVDCNSFDMPTADSFIPQTNIDEVQNPESINMGNTEKEGLGKEIGSKLVTDVPINYVQNPVLHKSILEEDSDQDHGNPAASEMVDVSCKKKRGPGSAEKKAKKKKKERKKRAKKNKQLGVKRLKLSLVQQKPKTISYCRHFLVGRCYEGDKCHFSHDTVPSTKSKPCSFFARHSCMKGDDCPFDHQLSKYPCVNFVSGGFCVRGDACLFSHQSPAKEDFAPASSVHNPGMKSPHFSGNTNSNMPPNILGCSSIQQNHLINPPRVHSDINSEHKATNTVQKQLKLASKGVSFVDVAKLSLPSPTTPKEGTTKVGSSSSDQRTSGTNQTLVEIPKKLPARIPKGIKFLAFGKDAVCSFKSSVNSLVIGENSIDFLQNISFSLLDHTSSSLKDATKGRVPPTDLVSSEISGKNQSVAESIKSSFPGKASMNDASTGLQGSSHVDDNGSKPVQEASGASDSFQISAATPSPFMRLGSPSSSEQLLSRKELLSTVLSFAAEHESVIKMKDSAGTSTA* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0737 658 Coils Coil 242 262 - -
Ahy9g0737 658 MobiDBLite consensus disorder prediction 241 262 - -
Ahy9g0737 658 MobiDBLite consensus disorder prediction 215 262 - -
Ahy9g0737 658 Pfam CCCH-type zinc finger 284 303 IPR041367 -
Ahy9g0737 658 ProSiteProfiles Zinc finger C3H1-type profile. 278 305 IPR000571 GO:0046872
Ahy9g0737 658 Gene3D - 272 335 - -
Ahy9g0737 658 ProSiteProfiles Zinc finger C3H1-type profile. 337 360 IPR000571 GO:0046872
Ahy9g0737 658 SMART c3hfinal6 279 304 IPR000571 GO:0046872
Ahy9g0737 658 SMART c3hfinal6 307 333 IPR000571 GO:0046872
Ahy9g0737 658 SMART c3hfinal6 335 359 IPR000571 GO:0046872
Ahy9g0737 658 MobiDBLite consensus disorder prediction 567 602 - -
Ahy9g0737 658 MobiDBLite consensus disorder prediction 448 473 - -
Ahy9g0737 658 SUPERFAMILY CCCH zinc finger 336 359 IPR036855 GO:0046872
Ahy9g0737 658 MobiDBLite consensus disorder prediction 55 79 - -
Ahy9g0737 658 MobiDBLite consensus disorder prediction 446 473 - -
Ahy9g0737 658 MobiDBLite consensus disorder prediction 534 554 - -
Ahy9g0737 658 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 58 502 IPR045124 GO:0003723|GO:0045892
Ahy9g0737 658 SUPERFAMILY CCCH zinc finger 278 303 IPR036855 GO:0046872
Ahy9g0737 658 PANTHER PROTEIN SUPPRESSOR OF SABLE 58 502 - -
Ahy9g0737 658 ProSiteProfiles Zinc finger C3H1-type profile. 307 334 IPR000571 GO:0046872
Ahy9g0737 658 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0737 Ahy-Chr9 11274778 11283288 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy9g0737 zf-CCCH_4 2.40E-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0737 - - ahf:112710376 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0962 19 15022133 15029538 Ahy9g0737 9 11274778 11283288 hybridization