Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0729 ATGCAACAGAGGGGTTTTCCACTAACAACTAAATTGGATTTGGAAGCTTTGGTTCTGTCTACAAGGGATTTCGTTGCTATAAAGGTAATGAACATCGAAACGAATGAAGCCAACAAGAGTTTCATTGCTGAATGTAATGCACTGAAGTTTATGAGGCGTAGAAATCTTGCAAAGATTTTAACTTGTTGCTCAAGCATTGATTTCAAAGGCAATGATTTCAAAGCATTGGTGTTTGAGTACATGGCTAACGGAAGCTTAGAAAAGTGGTTGCAACCTTGTGGTGAAAGCATTGAAGATGAATCACATCCATTGGACCTTGCTCAAAGATTGAACATTCTAATTGATGTGGCAAATGCATTACATTATCTTCACTATGAATGCGTGGAACCAATCATTCACTGTGATTTAAAGCCAAGCAATGTGCTCCTTGATGATCACATGGTTGGTCACGTGACTGATTTTGGGTTAGCAAGGCTTCTCACAGATTCTAATCAGCAATCTACCACCATTGGGTTAAAGTTTAGTTTTTAA 531 0.3823 MQQRGFPLTTKLDLEALVLSTRDFVAIKVMNIETNEANKSFIAECNALKFMRRRNLAKILTCCSSIDFKGNDFKALVFEYMANGSLEKWLQPCGESIEDESHPLDLAQRLNILIDVANALHYLHYECVEPIIHCDLKPSNVLLDDHMVGHVTDFGLARLLTDSNQQSTTIGLKFSF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0729 176 SMART serkin_6 9 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0729 176 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 22 164 - -
Ahy9g0729 176 Pfam Protein kinase domain 19 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0729 176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Ahy9g0729 176 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 164 - -
Ahy9g0729 176 SUPERFAMILY Protein kinase-like (PK-like) 21 167 IPR011009 -
Ahy9g0729 176 Gene3D Transferase(Phosphotransferase) domain 1 15 174 - -
Ahy9g0729 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0729 Ahy-Chr9 11179176 11179915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0729 15 167 Receptor kinase-like Gene Family AT3G47570 57.051 1.76e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy9g0729 Pkinase 4.10E-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0729 - - ahf:112710369 357.836