Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0714 ATGGCGAACAAACATTCACCTTTGGAGCCACACGAACTCAGCAGCGACCAGGGTTCCTACTGTGACGATTTCGAAGGAGATCCCTTTTATGAAGAAACGGAGAGCAAGTTCTCATACCTCTCACTCTCACCTTCCACGAACAAGGCACAAGCAAGAGTTGTTGATGGTACAAATCCAGAAGAGATAGAGATAACAACACCTGCTTCTAACGAAGTAAATTTTGAGAGGGTTGAAAGGTTAATCAAAGGGGGAATGCTAGAGAGATTGAAAGTTGACGAATGCAAGTTGTATTTGCGAAAGAATTGTCTTAGGCTATCTGGAAATAAGGATGTACTCGTCCAGCGTATTAAGGAGCATCTGCAGATCATAAATGGTGGAGGCGAAAGAAAGTACCCACGCTCTAGCTTTGTGTTGGACTGTAAAGGTGATGCATGCACTGGGGATGTTGTTTTGTTTGAGCAGAATGTTTATGAAATGTTCAACATAGCATCTAGAAGTGCCAGCGGTCCATCATGTGGTAAAAGGACTGTTGCAGGTCGCATAGTGAAAGAAAGCTATGGCACTGCCAAGCAGCAGCATACTTTTACGATTGAAGTACTCTGGAGCAAAGGAGAAAAGCCTTTTCCTCCGCTTCATCCCCTATTGATTAAGGGTCGAAACCTTTATAGGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGGGGAAAGGCAGAAAATATTGACGGAGAAACACTCGAGGGGATCTATTGCTCGGGCAGATAGAGAAGCAAGGGTACAAGAAAAAGTGAACAGACAAGCAATTGTGGAAAACAGGGTCTCCAGAAAGCATTCAGTAATACATCATCCTCATGCCATTAATCAAGAAAAACCAGCATTCCCATCTAAGAGTTCAGCTGTATCTGCCATTAATCAAGAAAAACCACCATTCCCATCAGCAGTGACCGAACAGTGGAGTAAGTCTGCTAGTTCTAGACGATCGAATGAATCGACATCATTTGGTGTTAACCATGTAAATAACCAGCAAGATTGGAAGCACTCATCTGACCCAATCATTAAAGCTCAACTTGGTGACCTCCACTCCAAAGAAAAAGGGCAATACCAATACCATCCTAGTGAGAGAAACAGGTTTGCACACAGAAATCCTTTGACTAGTGCTAATCACCTTCTTCCGTTGCTGAACAACAGAGAAATCCACAAGCAAAAGCAGCTATGTAGATATTATGCTGGTGGGGGGTGCTATTTTGGGGACAATTGCAAATTTGTACATGATTTGATACTATCAAATCAAGAACAAAGTCTTATCCAGTAG 1311 0.4264 MANKHSPLEPHELSSDQGSYCDDFEGDPFYEETESKFSYLSLSPSTNKAQARVVDGTNPEEIEITTPASNEVNFERVERLIKGGMLERLKVDECKLYLRKNCLRLSGNKDVLVQRIKEHLQIINGGGERKYPRSSFVLDCKGDACTGDVVLFEQNVYEMFNIASRSASGPSCGKRTVAGRIVKESYGTAKQQHTFTIEVLWSKGEKPFPPLHPLLIKGRNLYRLKTLRQKWEDEGERQKILTEKHSRGSIARADREARVQEKVNRQAIVENRVSRKHSVIHHPHAINQEKPAFPSKSSAVSAINQEKPPFPSAVTEQWSKSASSRRSNESTSFGVNHVNNQQDWKHSSDPIIKAQLGDLHSKEKGQYQYHPSERNRFAHRNPLTSANHLLPLLNNREIHKQKQLCRYYAGGGCYFGDNCKFVHDLILSNQEQSLIQ* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0714 436 MobiDBLite consensus disorder prediction 283 348 - -
Ahy9g0714 436 SMART c3hfinal6 400 425 IPR000571 GO:0046872
Ahy9g0714 436 SUPERFAMILY CCCH zinc finger 399 424 IPR036855 GO:0046872
Ahy9g0714 436 MobiDBLite consensus disorder prediction 1 26 - -
Ahy9g0714 436 Pfam SAP domain 86 120 IPR003034 -
Ahy9g0714 436 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 14 424 IPR045124 GO:0003723|GO:0045892
Ahy9g0714 436 MobiDBLite consensus disorder prediction 291 348 - -
Ahy9g0714 436 SUPERFAMILY SAP domain 75 121 IPR036361 -
Ahy9g0714 436 ProSiteProfiles Zinc finger C3H1-type profile. 400 426 IPR000571 GO:0046872
Ahy9g0714 436 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE 14 424 - -
Ahy9g0714 436 Gene3D - 355 433 - -
Ahy9g0714 436 Pfam CCCH-type zinc finger 404 424 IPR041367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0714 Ahy-Chr9 10983607 10987377 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy9g0714 SAP 7.50E-07 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0714 - - ahf:112777670 835.869