Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0647 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGGAAGTATGAGCTTGGACGCCAGCCAGCCAACACTAAGCTATCGAGCAATAAGACGGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACCGGAAACTATTCATGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCAAACAATGAGCTCGTGCGAACTCAGACTCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCCCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACGGCTGCTGCCAAGAAGGATGCTGAGGAAGGTGAGACCCCTGCGGAGGAAGCCAAGAAAAGCAACCATGTGCAGAGAAAAATCGAGAAACGTCAGAAAGATCGTAAGCTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTATATTTTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAAATCCAGAAGAAAAAGGGAAAGGGTGCTGCCTAA 654 0.4801 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAEEGETPAEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0647 217 MobiDBLite consensus disorder prediction 131 167 - -
Ahy9g0647 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Ahy9g0647 217 Gene3D - 25 212 - -
Ahy9g0647 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Ahy9g0647 217 CDD Ribosomal_S8e_like 5 196 - -
Ahy9g0647 217 MobiDBLite consensus disorder prediction 1 22 - -
Ahy9g0647 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Ahy9g0647 217 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Ahy9g0647 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Ahy9g0647 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0647 Ahy-Chr9 9865706 9868125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0647 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.366 9.36e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0647 K02995 - rcu:8277586 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0885 19 13598612 13601012 Ahy9g0647 9 9865706 9868125 hybridization