Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0627 ATGGGTTCTGTTTGTTGTTGTTTGAGTGTTAATGATTTTGAAGATGATATGAATCCAAATAGTCCTGTATATAGGAACGGTGGGTGCATCAGTTCCGTCTTACAGAACTTTTTGAATGCGTATGCATCAATATTCCGTAGAGGGGAAATGCAGGAAATTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCCACAGCATCACTTGATAATTCTCTATATGACATGTACCGCTCTCCTCCAAGGCCAATGCCTTATGATGCAGACCCAAGGCATTTCCGCTCTCAGCATGATAGACTAGTTTCACGACGTGAGAGGGGTTCAAGTCATGTGAATGATGAGGCAGAACCTCTAAGAAGTGATGTAGATGAGGATGACCAACAATCTTTAACTTCAAGCAACGAGTGGCATGAACATGCCAGTGAAGATGGATCCAAAGAAAACCATTCTAAGTCTTTATTAAGGCTTTCATCAGCAGAACCTACCACTGGAGTTGGACTTGTCTATTCGTCCTCAGAAGAGGAGGATTGCTGTCCAACTTGTCTTGAAGAATATACTGAAGAGAATCCGAAGATAGTGACAAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACACCTGTCCAGTTTGTGGGAAGGTGATGGTATTTGATGAAACGATGTAA 687 0.4192 MGSVCCCLSVNDFEDDMNPNSPVYRNGGCISSVLQNFLNAYASIFRRGEMQEIPSSIQGAASMTSTASLDNSLYDMYRSPPRPMPYDADPRHFRSQHDRLVSRRERGSSHVNDEAEPLRSDVDEDDQQSLTSSNEWHEHASEDGSKENHSKSLLRLSSAEPTTGVGLVYSSSEEEDCCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDTCPVCGKVMVFDETM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0627 228 MobiDBLite consensus disorder prediction 98 157 - -
Ahy9g0627 228 MobiDBLite consensus disorder prediction 73 92 - -
Ahy9g0627 228 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 227 - -
Ahy9g0627 228 Pfam RING-H2 zinc finger domain 173 218 IPR024766 GO:0008270
Ahy9g0627 228 MobiDBLite consensus disorder prediction 98 150 - -
Ahy9g0627 228 SUPERFAMILY RING/U-box 173 224 - -
Ahy9g0627 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 225 IPR013083 -
Ahy9g0627 228 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 227 - -
Ahy9g0627 228 SMART ring_2 178 218 IPR001841 -
Ahy9g0627 228 ProSiteProfiles Zinc finger RING-type profile. 178 218 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0627 Ahy-Chr9 9135801 9136966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0627 1 226 C3H Transcription Factor Family AT5G38895 50.885 1.13e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0627 - - ahf:112797939 433.721