Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0539 ATGGGAAGGGCTCCTTGTTGTGAAAAAGTGGGGTTGAAGAAGGGAAAGTGGACAGAAGAGGAGGATGAACTATTAACAAAGTATATAAAAGCCAATGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGATGTGGTAAGAGTTGCAGACTGAGGTGGGTTAACTATTTGAAAGGTGGCATCAAAAGAGGGAACTTTTCAGCTGAAGAGGAAGACACCATCGTCAACTTGCAAGCTTCTTTTGGCAACAGGTGGGCAACAATAGCAAGCCATTTGCCAGGAAGAACAGACAATGAAATAAAAAATTACTGGAACTCTAACCTCAGCAGGAAACTCTACTGTTTCCCGAGAGTAGCAACTACCATACACACTACCCTCCCGGGCTTCACCGATGTCCTTCCTCCTAAGCCAAGACCACGTGGCATCAGATCAAGCCGTTCATCCATCATCATCAACAATAACACACAAAACCCTAAAGAAACCGCACCTCACAAGAACAAAGATGAAGACTTTCTTATCCCAGCACCTTCAACTCCTTTCATATATAGTGAGGCTTTGTTCAACACCATGGAGGATTTCATGGTCTTGGACATGGACTTGGATTTCATGAAGCTTAGCACCACGGTGTTGAAAGCAGAAGACGAAGACGACAATGACGACCACGACGAAGAAAAAGTACACTGGACAACAATGTATGAGAAACAAATCATAGATGAACAAGTTGACCATAAGGTTGGAATCTTAAATGAAGAAAGCATGACTACTAGCAATAATAGTTTGGGTGTGGACCAAACTAGAGAGGGTAGTAGTAATGATAATGTGAATAACAAGATGAGCTCCAATGGGGAAAGTGGAGAGTGCTGGAAAGTGGGAATGAATGAGAATAATCATCACTTGGATATGGAGAGTATTATGGAGTTTAATAATGGGTCTGTGAATAGAGAGAACTTGCTGACATGGCTGTGGGAAGATGACTGGGAAAGCGATTGCATTAAATTGGCAGAGATGTTGGGTCCCCATAATCAAATTGATGATATCGTTTCCTGGTTACTCTCATGA 1071 0.422 MGRAPCCEKVGLKKGKWTEEEDELLTKYIKANGEGSWRSLPKNAGLLRCGKSCRLRWVNYLKGGIKRGNFSAEEEDTIVNLQASFGNRWATIASHLPGRTDNEIKNYWNSNLSRKLYCFPRVATTIHTTLPGFTDVLPPKPRPRGIRSSRSSIIINNNTQNPKETAPHKNKDEDFLIPAPSTPFIYSEALFNTMEDFMVLDMDLDFMKLSTTVLKAEDEDDNDDHDEEKVHWTTMYEKQIIDEQVDHKVGILNEESMTTSNNSLGVDQTREGSSNDNVNNKMSSNGESGECWKVGMNENNHHLDMESIMEFNNGSVNRENLLTWLWEDDWESDCIKLAEMLGPHNQIDDIVSWLLS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0539 356 MobiDBLite consensus disorder prediction 135 170 - -
Ahy9g0539 356 CDD SANT 69 112 IPR001005 -
Ahy9g0539 356 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 331 - -
Ahy9g0539 356 CDD SANT 16 61 IPR001005 -
Ahy9g0539 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy9g0539 356 MobiDBLite consensus disorder prediction 149 164 - -
Ahy9g0539 356 PANTHER MYB TRANSCRIPTION FACTOR 2 331 - -
Ahy9g0539 356 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy9g0539 356 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy9g0539 356 Gene3D - 69 116 - -
Ahy9g0539 356 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy9g0539 356 SMART sant 66 114 IPR001005 -
Ahy9g0539 356 SMART sant 13 63 IPR001005 -
Ahy9g0539 356 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy9g0539 356 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy9g0539 356 MobiDBLite consensus disorder prediction 256 287 - -
Ahy9g0539 356 MobiDBLite consensus disorder prediction 256 289 - -
Ahy9g0539 356 Gene3D - 11 67 - -
Ahy9g0539 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0539 Ahy-Chr9 7600293 7607068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0539 1 141 MYB Transcription Factor Family AT5G49330 67.376 1.70e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy9g0539 Myb_DNA-binding 2.00E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0539 K09422 - gmx:100814275 271.166