Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0526 ATGGACACTACTCCGGCGAGGTTCATGTTGAGCTACGGTGGCGAGATCAAGCCCCGCGACGGCCACCACCACCGCTCCTCCTATGCTGGCGGCGTCCACAAGATGTTCCACGTTGACGGCAACATAAACTTCGACGATATGACCGCCAAGCTCTCCTTACTCAAGGGCGGCGATGCTGTAACCTCCTTTAAGTATCTCATCCCCGGCGACGACCTCGATACCCTGGTCACTGTCGACAACGAGATGGACCTCAGTAACCTTATGAGCGAATACGATCTGCACTGCCACGGTTCCGGTTGGCTCGCCCCGATGAGGATCTTTCTCGACACCGTCGAACAAGGCGGCGTCGCTGTTGTTCCTCAGGCACCTGTTCCGCCGAGTGCCTCTGACGAGGATCGCGTGAACATGGAGCTGGAGGGTCAGTTGGAGCAGCAGTGGGGGCGCGTTTCGGGTCGCGCGTCGTTCTCTTTGCCCGGACCGTTAACTCTTGCATCGGCGCTCTTCTTACTCGTTGCCCTGATTCTTCTTGTTTCGCTACCGATGGCACTTCTCATACTTCAAAACTATTCAATTAAGAACGCAATGACCGAGATCAGGAGCACAGAACCTCCTCGCGACAGGCTTATTCAATTCGAGAAGTCCATCAATCAATTACCTGAAGTACTGCAGGTCCCCGCTAAGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCAGTTGCTAAAATCATACAAAATGGCAATATAGATGACAAGGAACTCATTGATATAATTGTTGAGGTGGTTGGAAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTGGTGGATCATATTTTTCCCCACCTTGATTCAATTGGTCCTGGACCACTCATTGTTGAGAGGGCTAAAAGTTTCTTAGGTAATGTTCTTCTTGATTCTATTCAGGTGGTTATTATGCAACTTCAATTTTTGTTCTGTTTTTGGATACGAATCTTTTTTAGATCCAATGTTAACGTGGCATGTTTGTGCACCAGGCTAATTTTTTTTCTTTTCAAAGAGACTAATCTCGTTTCGAGGATAGTGAGACCTGCTCCCTCAATTGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1857 0.4453 MDTTPARFMLSYGGEIKPRDGHHHRSSYAGGVHKMFHVDGNINFDDMTAKLSLLKGGDAVTSFKYLIPGDDLDTLVTVDNEMDLSNLMSEYDLHCHGSGWLAPMRIFLDTVEQGGVAVVPQAPVPPSASDEDRVNMELEGQLEQQWGRVSGRASFSLPGPLTLASALFLLVALILLVSLPMALLILQNYSIKNAMTEIRSTEPPRDRLIQFEKSINQLPEVLQVPAKDTIEMVLHDKKGSRIHASLPKALVKKFCPVAKIIQNGNIDDKELIDIIVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHIFPHLDSIGPGPLIVERAKSFLGNVLLDSIQVVIMQLQFLFCFWIRIFFRSNVNVACLCTRLIFFLFKETNLVSRIVRPAPSIDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0526 618 SUPERFAMILY CAD & PB1 domains 26 110 - -
Ahy9g0526 618 Pfam PB1 domain 25 108 IPR000270 GO:0005515
Ahy9g0526 618 SUPERFAMILY Nucleic acid-binding proteins 456 593 IPR012340 -
Ahy9g0526 618 CDD RPA1_DBD_C 455 594 IPR013955 -
Ahy9g0526 618 Gene3D - 441 601 IPR012340 -
Ahy9g0526 618 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 6 114 - -
Ahy9g0526 618 Pfam Replication factor-A C terminal domain 481 575 IPR013955 -
Ahy9g0526 618 PANTHER OS05G0427100 PROTEIN-RELATED 6 114 - -
Ahy9g0526 618 SMART PB1_new 5 98 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0526 Ahy-Chr9 7345335 7348589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0526 7 115 MAP Kinase Kinase Kinase AT5G57610 38.393 6.04e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0526 - - ahf:112710177 1203.73