Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0523 ATGGATACTACGCCGGCGAGGTTTAAGTGCAGCTACGGCGGCGAGATCAGGCACCACGACGACGAACACCACCGCTACCCCTACTATGCTGGCGGCATCCACAGGATGCTCCAAGTTCAAGGCGACATAAATTTTGCTGTTATGACCGCCGAGCTCTCCTTACTCTGCGGCGGCGCTGCCGTAACCTCCTTTAAGTACCTTATCCCCGGCGACGACCTCGACACCCTGGTCACCGTCTCCGATGACAGGGACTTCTGTTACCTTATGCGCGAATACGATCTGCACTACCGCGGTTCCGGTTCTCTCGACCCGATGAGGATCTTCCTCGACATCGTCGAACAAGGCGGCGGCGCTGTTGCTCCTCAGGCACCTGCCCCGCTGAGTGCCTCCGACGAGGATCGATGCGTGAACATGGAGCTGGAGGGTCAATTGGAGACGCAGTGGGGGCGCGTGGGAGGTCGCGTTTCGTTTTCTTTTCCCGGGCCGTTGACTCCTGCATCGGCCCTCATACTCTTCGCTCTGATTCTTCTTCTTTCGCTACCAATCGCATTCGTACTTCAAAATTATTTAGTTACGAATGCTGTTGCAGAGTTCAGGGACTTTGAACATCATCGTGACGGGATTATTCACTTTGAGAAGCACATGAATCAATTACCTGGAGCATTGGAGGTTCCCGCTAAGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCTGTTGCTAACATCATACAAAACGGCAATATAGATGACAAGGAACTCATTGATATATTTGTTGAGGTGGTTGGTAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTAGTGGATCATATTCTTCCCCACCTTGATTCAATTGGTCCTGGACCACTCATTGTTGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAGGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCGCAACCTAGCTATTCTGTGAGTGATGAGATTAACGGCGCATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGTATAGTGTGTTTGGATGTTGGAAAAGATGATTGGCTTTACAAGGAATGTACCCGATGCCCCCAGAAGCTAGAAGGTGCTGAACCATTTTATTGCAAGAGATGTGATCAAGTGGATTCCAATCCTCTTTTACGGTTTAGGCTTCAAGTTATAGTGTCTGATGGCACGGGAAGTATAACATTGGTTCTGTGGGATAGGGAAGCCATGCAAGTTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTCATTTGATGATGGTGATGCAGACACTTATCCTAAAGCTCTTGATTCAGTGATAGATACAAAGCTTCTGATTAAGGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGGTGATGAAGAATTGATTACAAAATTGGGCCATGATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1698 0.457 MDTTPARFKCSYGGEIRHHDDEHHRYPYYAGGIHRMLQVQGDINFAVMTAELSLLCGGAAVTSFKYLIPGDDLDTLVTVSDDRDFCYLMREYDLHYRGSGSLDPMRIFLDIVEQGGGAVAPQAPAPLSASDEDRCVNMELEGQLETQWGRVGGRVSFSFPGPLTPASALILFALILLLSLPIAFVLQNYLVTNAVAEFRDFEHHRDGIIHFEKHMNQLPGALEVPAKDTIEMVLHDKKGSRIHASLPKALVKKFCPVANIIQNGNIDDKELIDIFVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHILPHLDSIGPGPLIVAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSVSDEINGALVRLKSIEELLNCANEGSYWILASIVCLDVGKDDWLYKECTRCPQKLEGAEPFYCKRCDQVDSNPLLRFRLQVIVSDGTGSITLVLWDREAMQVVGKTATEIKENSFDDGDADTYPKALDSVIDTKLLIKVAVSSRNINGYDDVYNVMRISGDEELITKLGHDAADSVDDEFHTTSS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0523 565 SMART PB1_new 5 112 IPR000270 GO:0005515
Ahy9g0523 565 SUPERFAMILY CAD & PB1 domains 25 110 - -
Ahy9g0523 565 Pfam PB1 domain 28 109 IPR000270 GO:0005515
Ahy9g0523 565 Pfam Replication factor-A C terminal domain 418 529 IPR013955 -
Ahy9g0523 565 Gene3D - 381 548 IPR012340 -
Ahy9g0523 565 SUPERFAMILY Nucleic acid-binding proteins 393 538 IPR012340 -
Ahy9g0523 565 CDD RPA1_DBD_C 392 538 IPR013955 -
Ahy9g0523 565 PANTHER OS05G0427100 PROTEIN-RELATED 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0523 Ahy-Chr9 7277969 7282622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0523 7 116 MAP Kinase Kinase Kinase AT5G57610 38.053 1.36e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0523 - - ahf:112710177 460.299