Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0476 ATGGCCTTTTCTGATGTTTATTCTGCTCCTACACCTCCACCTCCACCTCTCACGAAGTACGATGTTTTTATCAGCTTCAACGGTAAAGACACTCGTAACGGCTTCACTAGCCACCTTCACTACGCTCTGTGCAGAAACCAAATCGAAACATTCATAGATTACAGAATTGAGAAAGGTGGTGAGATCTGGGAAGAACTCGTGCAAGCTATAAGAGAGTCTTCGGTGTATCTGATCATCTTCTCAGAACACTATGCGTCTTCAAAGTGGTGCTTGCGGGAACTTGCTGAGATCATAGAACTCACAAACATGGTGGAAAAGGGACACCACCATATTATTCCTGTGTTCTACAGGATTGAACCCACGCATGTTCGGAAGCAGACGGGAAGCTACTACAGTGTGTTCGCAGAGTATGACAGAAATTTGGATAATCGCCTTGTGCGCCAGTGGAGGAAGGCACTCTTCCAAGCAGCCAATATCTCCGGCTTCGAATATAATCATCACCATAGTAGGACTGAATCTGACCTCATTGAAGGCATAGTCCAAATGATTATCCGAAAATTGGATCAGAAATACACAAGTGAACTCAGGAGCCCTTTTATACATGACCAAAATTATGCATCCATTGAATCTGTTTTGATCAACTCACAGGATGTTCGAACCATTGGAATTTGGGGCATGGGCGGCATAGGAAAAACAACTATTGCGGCTGCCATTTTTCAAGAGTTCTCTCCCAAGTATGAAGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAACTACATTTTCAATAGACTTCTTTCTGAGTTGCTGCAGGAACATGTTCATATTACCACTCCAAAGATTGTGTCTTCTGCTATAATCCGCAGATTGAGGCGTAAGAAAGTTTTCATTGTGCTAGATGATGTGAATACTTCTGAGCTTTTAGAAAATTTGCTTGGAGTGGGACAAGATTATCTTGGACTTGGTAGCAAAGTTATTGTTACCACTAGAGATAAGCATGTTCTTCTGAGTAGATCAGTTGATCACATCCATGAAGTCATGGAAATGAATGAGGAGAACTCTCTCAAACTGTTTAGCTTGAATGCCTTCAACAGAAACCATCCTCCTGAGAACGGGTACTGGGATCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCTTTAGCATTGAAAGTTTTGGGATCATTTCTTCATTCCAAAACTGAAAAGGAATGGGACAATGCATTGACAAAACTAAAGAGGATTCCTAATGCAGATATTCAGAAGGTGTTGAGGTTGAGCTTCAATGAATTAGATGATACAGAGAAGGATATATTTCTAGATATTGCATGCTTTTTTAAAGGAGAAGAGAAAGAAAAAGTGATAAGAATATTGAATGAGTGTGGCTTCTTTGCAGATATTGGAATAAGAAACCTTTTAGACAAGGCTCTTATATCAATAGCTACCAATAAAAGCATACAAATGCATGACTTGATACAGGAAATGGGTCACAAAATTGTATGTGAAGAATCTTTCAAGAACCCTGGAAAGCGGAGTAGAGTGTGGCACCCAGATGAAGTTTGCGATATATTAGAGAATGATAAAGGATCCGCTACGATTGAAACCATATACTTGGATATGACTCAGCGGACAGAAATATGTATTAGCTCCGGTGCATTTAGAAAGATGCCAAAGCTAAGGTTACTTGCTTTTGCTAGCAGCAGCATTGATTATGGGAGAAAAAGAGTTGATTATACATTGAGTCTTCCAACAAACTTGGAGTTGCCTAATAACTTGAGATACATTCAATGGGATAGATGCCCATTAAAATCTCTATCAACTACTTCTTGGCCTAACAAGCTTGTTGAACTCTCCATGCCATACAGTAACGTTGAAAAGCTTTGGGATGGCCCACAGAGTTTACCGAGCTTGGAGGAAGTTTTTCTCAGTGGTTCGAAGCGAATGATAGAGTGTCCAGATTTTTCAGGTGCCCCAAATCTAAAAACAATATGGCTCAATCAATGTGAAAGCTTGCCTCATGTTCATCCTTCTATTTTCTCCCTTCCAAAACTTGACTATTTAGCTGTCTACGGATGCAAAAAGCTTAAGAGCCTTTCCAGCAACAATTGTCCATTGTCTCTTCGCTCAGTGGTTGCCTACAACTGCCCAAATCTGGAAGAATTCTCAATCCCAATTTCAAAAAATCAGTCCAATATTCATGTCCATTTGAGGTCAACTGCCTTGAAACAACTACCATCGTCAATTGTGCATCTTCAAGATCTTACAAACTTCTCTTTTCCAATTAGTGATCTTCTCATGGCTCTTCCTGAAAAGTTCACCAATCAAATCATGCTTTCAGACCCTAATAACAAAGAATATGACTCAGTGGCCACCTTACGCAGAATACTACCCAGCCCTATGTTCCATTATCTAAAAGAATTGAAATTTGATGGATGTCAAAGTTTAATTGAACTCCCAGACAACATCTCTTTGTTATCATCATTGTTGGTGATAAGACTCCACAACACTAATATCATGACCTTTCCAGAAAACATTAAGACTCTTCCGAGACTCAAAATTGTTTTACTTTGTCATTGTGAAAGGTTACAATATGTGCCAGCGCTTCCACCTTCCGTTCATCACTTCAAGGCCTGGGACTGCAAATCTTTGAGGACAGTGTCAAGCTCCACAAGTGAACTAAAAAGACAACACGGTACTACTTTTATATTCGTAAACTGCTTGAAATTGGATGAAGAGTCATGCAATACCATTTTGGAAGATGCCATTGTTAGGATGGACACTAGGGCTAAAACACAACAACTCTCACCAAGATTGGAAGAAAATAGAAATGAAGAATGCACTGTTGTTGATGATGATGATGGCTTTCTTAGTGAGGATAACGCCAACGTTGGCAAGGTTTGTTATTTCTTGCCAAGTAGAGGCAGTAAACTTGGTGGCTTGTTCCATCGTGGCTCTTCACAAAATTCCATCAGCATTCAACTGCCACAAGGTTCCAATTTCTTTGGCTTCATATTCTACTTGGTTGTTCCACCAATACAACCATGCAATACTGGTGGTGACCTTGACATTAGGTTTGGGTTTGAATGTTACTTGGAAACAAGTTGGGGTCAAAGGACCCATATAGCAAGTTCGTCCTTAATAGAATGGAGCTGCGAATTTTATTATGGATATCAGATGAATCTTTTGTCGGATCATGTGTTATTATGGTATGATTCACAATGCTGTAAGCAGATAATGGAAATAATCAGAGGAAGAAAGGCCATTGATGATGATGACAAGAATGCAAATCTGGAAGTTAAGTTCTTTGCTCGGCTACCAAACAAGGAAGAAGTGGTGATAAAAGAGTGTGGCATCCGTTGGATATACACAAATATGGAGAAGGAATCAAGAGTGTGCAGGTTCAAGAGAAGCAGGCAAGTTTTCGAGTTAGAAGAAAAGGACTTGGAATCTGATGATGAAGGAGAAGAACTAGTTCCTCCAGCAAAGAAATTTAAGAATAGCTTAATGGAAGTTGAATCAGTAGAAAACTTGAGGAAAAAACTTGAACAACTTTTGCACATTCAATTTGATGGAGGCTTTCTTAACGCGGAGATCAAACTGGGGTACAATGTGTAG 3636 0.3988 MAFSDVYSAPTPPPPPLTKYDVFISFNGKDTRNGFTSHLHYALCRNQIETFIDYRIEKGGEIWEELVQAIRESSVYLIIFSEHYASSKWCLRELAEIIELTNMVEKGHHHIIPVFYRIEPTHVRKQTGSYYSVFAEYDRNLDNRLVRQWRKALFQAANISGFEYNHHHSRTESDLIEGIVQMIIRKLDQKYTSELRSPFIHDQNYASIESVLINSQDVRTIGIWGMGGIGKTTIAAAIFQEFSPKYEGSCFLANVREESSRHGLNYIFNRLLSELLQEHVHITTPKIVSSAIIRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGLGSKVIVTTRDKHVLLSRSVDHIHEVMEMNEENSLKLFSLNAFNRNHPPENGYWDLSKRALAYARGNPLALKVLGSFLHSKTEKEWDNALTKLKRIPNADIQKVLRLSFNELDDTEKDIFLDIACFFKGEEKEKVIRILNECGFFADIGIRNLLDKALISIATNKSIQMHDLIQEMGHKIVCEESFKNPGKRSRVWHPDEVCDILENDKGSATIETIYLDMTQRTEICISSGAFRKMPKLRLLAFASSSIDYGRKRVDYTLSLPTNLELPNNLRYIQWDRCPLKSLSTTSWPNKLVELSMPYSNVEKLWDGPQSLPSLEEVFLSGSKRMIECPDFSGAPNLKTIWLNQCESLPHVHPSIFSLPKLDYLAVYGCKKLKSLSSNNCPLSLRSVVAYNCPNLEEFSIPISKNQSNIHVHLRSTALKQLPSSIVHLQDLTNFSFPISDLLMALPEKFTNQIMLSDPNNKEYDSVATLRRILPSPMFHYLKELKFDGCQSLIELPDNISLLSSLLVIRLHNTNIMTFPENIKTLPRLKIVLLCHCERLQYVPALPPSVHHFKAWDCKSLRTVSSSTSELKRQHGTTFIFVNCLKLDEESCNTILEDAIVRMDTRAKTQQLSPRLEENRNEECTVVDDDDGFLSEDNANVGKVCYFLPSRGSKLGGLFHRGSSQNSISIQLPQGSNFFGFIFYLVVPPIQPCNTGGDLDIRFGFECYLETSWGQRTHIASSSLIEWSCEFYYGYQMNLLSDHVLLWYDSQCCKQIMEIIRGRKAIDDDDKNANLEVKFFARLPNKEEVVIKECGIRWIYTNMEKESRVCRFKRSRQVFELEEKDLESDDEGEELVPPAKKFKNSLMEVESVENLRKKLEQLLHIQFDGGFLNAEIKLGYNV* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0476 1211 Pfam Leucine Rich Repeat 620 637 IPR011713 -
Ahy9g0476 1211 Gene3D - 185 350 IPR027417 -
Ahy9g0476 1211 Gene3D - 17 184 IPR035897 -
Ahy9g0476 1211 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Ahy9g0476 1211 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 882 - -
Ahy9g0476 1211 SMART till_3 19 159 IPR000157 GO:0007165
Ahy9g0476 1211 PRINTS Disease resistance protein signature 220 235 - -
Ahy9g0476 1211 PRINTS Disease resistance protein signature 295 309 - -
Ahy9g0476 1211 PRINTS Disease resistance protein signature 390 404 - -
Ahy9g0476 1211 PRINTS Disease resistance protein signature 639 655 - -
Ahy9g0476 1211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 882 IPR044974 GO:0006952
Ahy9g0476 1211 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 162 IPR035897 -
Ahy9g0476 1211 Gene3D Ribonuclease Inhibitor 790 921 IPR032675 -
Ahy9g0476 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 449 IPR027417 -
Ahy9g0476 1211 Pfam TIR domain 19 193 IPR000157 GO:0007165
Ahy9g0476 1211 SMART AAA_5 217 354 IPR003593 -
Ahy9g0476 1211 Gene3D - 354 439 IPR042197 -
Ahy9g0476 1211 Pfam NB-ARC domain 207 432 IPR002182 GO:0043531
Ahy9g0476 1211 Gene3D Ribonuclease Inhibitor 535 739 IPR032675 -
Ahy9g0476 1211 SUPERFAMILY L domain-like 495 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0476 Ahy-Chr9 6165722 6177378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0476 6 868 WRKY Transcription Factor Family AT4G12020 31.207 1.47e-96 338