Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0454 ATGGTCTGCATATCTTTGGTCATGTTGCAGTCTTACTCACTGTTGTTTTCTAATCAATTAGGAGTTGCAAGAATAATTCAAAGAAACAGACAAGGACAGAAGGTCACTGAGCTACCAATATTTGATTTCTCAGTCTTAGTTAAGGCAACAGAGAACTTTTCAAGTAGTAACAAACTTGGAGAAGGTGGTTTTGGATCAGTATACAAGGGCACACTAACAAATGGCCAAGAGTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTAAACAAGGTTTAGAAGAGTTTAAAAATGAAGTGGCATTGATAGCCAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGCTGTTGCATTCAAGGAGTAGAAAAAATATTGATTTATGAATACATGCTAAACAAAAGCTTAGACTACTTTGTTTTTGATGAAATCAGAAAGAAGATGCTAGATTGGCTTAAGCGTTTCAACATTATCAGTGGCATTGCTTGGGGACTTCTTTATCTTCATCAAGATTCTAGACTGAGGATTATTCATAGAGACCTAAAAACTAGCAATATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGAACATTCTTAGGCGATCAGCTTGAGGCTAACACGAACAGGGTAGCTGGAACATATGGTTATATGCCTCCCGAGTATGCAGTACATGGACAATATTCAATGAAGTCTGATGTTTTTAGCTATGGTGTCATACTACTAGAGTTGATAAGTGGGAAGAATAGAGAATTTTCAGATCCAGAAAACTACCTTAACCTTCTTGGACATGCATGGAGATTATGGACTGATGAGAAGCCATTGGAACTGCTAGATGAAGTGTTAAAGGAAGGATGCACACCACTTGAAGTAAAAAGATGCATTCAAGTGGGCCTGTTATGTGTGCAACAAAGACCAGAAGATAGACCAGACATGTTATCAGTGGTTCTAATGTTGAATGGTGAGAAATTACTGCCCAAGCCAAAGGTTCCTGGTTTTTATACTGAAAGAGGTGTTACAATTGAAGCAGATTCTTTGATGGAAAATCACACATTGTTTTCAGCCAATGAAATCTCCATCACAACATTATATGCAAGATAG 1113 0.372 MVCISLVMLQSYSLLFSNQLGVARIIQRNRQGQKVTELPIFDFSVLVKATENFSSSNKLGEGGFGSVYKGTLTNGQELAVKRLSKKSKQGLEEFKNEVALIAKLQHRNLVKLLGCCIQGVEKILIYEYMLNKSLDYFVFDEIRKKMLDWLKRFNIISGIAWGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRVAGTYGYMPPEYAVHGQYSMKSDVFSYGVILLELISGKNREFSDPENYLNLLGHAWRLWTDEKPLELLDEVLKEGCTPLEVKRCIQVGLLCVQQRPEDRPDMLSVVLMLNGEKLLPKPKVPGFYTERGVTIEADSLMENHTLFSANEISITTLYAR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0454 370 Gene3D Transferase(Phosphotransferase) domain 1 129 330 - -
Ahy9g0454 370 Pfam Protein tyrosine and serine/threonine kinase 56 320 IPR001245 GO:0004672|GO:0006468
Ahy9g0454 370 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 10 367 - -
Ahy9g0454 370 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 367 - -
Ahy9g0454 370 CDD STKc_IRAK 59 325 - -
Ahy9g0454 370 ProSiteProfiles Protein kinase domain profile. 53 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0454 370 SUPERFAMILY Protein kinase-like (PK-like) 34 323 IPR011009 -
Ahy9g0454 370 Gene3D Phosphorylase Kinase; domain 1 19 128 - -
Ahy9g0454 370 SMART serkin_6 53 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0454 370 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Ahy9g0454 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0454 Ahy-Chr9 5782049 5784020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0454 42 370 Receptor kinase-like Gene Family AT4G23140 56.305 2.19e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy9g0454 PK_Tyr_Ser-Thr 3.40E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0454 - - aip:107614884 592.423