Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0386 ATGGTCTATAAGAACCCTAATTCTGTGTTGCAGTCGAAAAAGGAAAAGATGACGACTGTTCCAGGGCAATTGGTGTGGGAGATCGTGAAGAAGAACAACTGCTTCTTGGTGAAAGAGTTCGGAAGGGGCACTCAGAGTGTTGAATTCAGCAGAGAGCCTAACAATCTCTACAATCTCAACTCCTTTAAATACTCAGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAGGATCAGGGTGTGTTGTTGGCTACAACCAAGACCAAGAAGCAGAACAAGCCTTCTGCTCTTCTTCACAAGTCTCTGATGAAGAAGGAGTTCAGTAGGATGGCTAAGGCTGTTCAAAATCAGGTGTCAAAAAACCACTACAGGCCTGATCTCACTAATGCAGCTCTTGCAAGGTTGAGTGCCGTCAATAGAAGCATCAGAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGGCTTGAAGATCCGTGGCAGGAAGTGGAAGTGA 507 0.4556 MVYKNPNSVLQSKKEKMTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNSFKYSGLANKKTVTIQPAGKDQGVLLATTKTKKQNKPSALLHKSLMKKEFSRMAKAVQNQVSKNHYRPDLTNAALARLSAVNRSIRVAKSGVKKRNRQGLKIRGRKWK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0386 168 Gene3D - 22 149 - -
Ahy9g0386 168 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 17 166 - -
Ahy9g0386 168 PANTHER 60S RIBOSOMAL PROTEIN L28 17 166 IPR002672 GO:0003735|GO:0005840|GO:0006412
Ahy9g0386 168 Pfam Ribosomal L28e protein family 24 144 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0386 Ahy-Chr9 4562619 4565556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0386 17 159 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 3.82e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0386 K02903 - gmx:100499963 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0211 18 1678819 1680365 Ahy9g0386 9 4562619 4565556 PCT
Ahy9g0386 9 4562619 4565556 Ahy18g0211 18 1678819 1680365 PCT