Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0368 ATGGATGGTCTCAATTGGGATGATGCAACTTCACAAATTGCAAGAAATAACACACCAATCTTATGGAGCAAACAACAACAAAGTCAAGAAATAATTCTTACATACCCAAATTCAGAACATTTGATTAATTATCAGCAGCAAGATGCAGCAACAGTAGTGAAATCTTCAGCCATAATGTCACTATCAGAAAATGGACCTTACAACATGGATAATTATTACCAGATAAGTGGTAAGTACATGACAGATTTCAACATGGCCCAACACCACCAACAACATGATCATCATCATCATTGCTTGATTTCATCAGCTACAAATAGCAACACTAATGATGATGATAATGATGGGATTTCAAAGATCTTGTTATCTGATGATGATTGCAAGAACTACTTCTGGAACTTGAGTAGTTCCACTACTGATGCTGCTTCCTCTGCTGAATCTGAAAGCAACAATAATAATAATGATGCTTCTACTATGCTTCCATGCTCTCATCAAAACTCCTCAGATCATCAACAATACATCAACCAAGAAGGACAATTCAATCCTATTATTATCACTAATAAGGATCAATCACCAATTATCAAGATAGAGAATCCACCAAGATCCAAGAAACCCAGATGGGAAAAGACTCCATTTTCATCAACAATAAGTTTCCAAATCCCAAATGAAGCATCAGCAACAATGTCATCAACTTCAACCACTGAAGAAGAAGCTGATCCAGAGGCCATAGCACAAATGAAGGAAATGATATACAGAGCAGCAGCATTCAGGCCAGTGAACTTGTTAGACTCAGATGAAGTGATTGAGAAGCCAAAGAGGAAGAATGTGAGGGTTTCAAGTGATCCACAAACTGTGGCTGCAAGGCAAAGAAGAGAGAAAATAAGCCAAAAAATCAGGGTTTTGCAGAAGATTGTTCCTGGTGGAACCAAAATGGACACTGCATCAATGCTTGATGAAGCTGCAAATTATCTTAAGTTTTTAAGGTCACAGGTTAAGGCACTTGAAAATTTAGGGAACAACACTACTAAAGTTGAAGCAATGGATTATAATAATTATAATAGTTTTGTATTCTCTTTCAACCCTTCCTTCCATTCTCAAATTCATTTTTGA 1107 0.3668 MDGLNWDDATSQIARNNTPILWSKQQQSQEIILTYPNSEHLINYQQQDAATVVKSSAIMSLSENGPYNMDNYYQISGKYMTDFNMAQHHQQHDHHHHCLISSATNSNTNDDDNDGISKILLSDDDCKNYFWNLSSSTTDAASSAESESNNNNNDASTMLPCSHQNSSDHQQYINQEGQFNPIIITNKDQSPIIKIENPPRSKKPRWEKTPFSSTISFQIPNEASATMSSTSTTEEEADPEAIAQMKEMIYRAAAFRPVNLLDSDEVIEKPKRKNVRVSSDPQTVAARQRREKISQKIRVLQKIVPGGTKMDTASMLDEAANYLKFLRSQVKALENLGNNTTKVEAMDYNNYNSFVFSFNPSFHSQIHF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0368 368 PANTHER TRANSCRIPTION FACTOR BHLH87 1 367 - -
Ahy9g0368 368 CDD bHLH_AtIND_like 278 336 - -
Ahy9g0368 368 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 367 IPR045843 GO:0003700|GO:0006355
Ahy9g0368 368 Gene3D - 282 347 IPR036638 GO:0046983
Ahy9g0368 368 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 282 335 IPR036638 GO:0046983
Ahy9g0368 368 SMART finulus 283 332 IPR011598 GO:0046983
Ahy9g0368 368 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 277 326 IPR011598 GO:0046983
Ahy9g0368 368 Pfam Helix-loop-helix DNA-binding domain 287 326 IPR011598 GO:0046983
Ahy9g0368 368 Coils Coil 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0368 Ahy-Chr9 4295603 4298052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0368 75 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 43.210 2.40e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g0368 HLH 4.30E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0368 - - aip:107616571 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0206 18 1650933 1652702 Ahy9g0368 9 4295603 4298052 PCT
Ahy9g0368 9 4295603 4298052 Ahy18g0206 18 1650933 1652702 PCT