Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0363 ATGGCTGCGACACGCATAGCTTCCTCCTTATTTTCTTCTTCAATCAACACTACTGTCAAAAATTGCTTCGCTTCAAAAACCATAACAGACCCTCCTCTCATAGCAATATCCTCCAATCGCAAGTTATCCTCACTGACCCAGTGCTATTATTTTGTGGAACCTTTGTCATTAATTGGTGTTACTAAGTTATGGACGCCTAAAACTTCAGCAGCTGTTGTTGTTTCACAAGAAGAAATTGCTTTGTCTGATGATGCGGGCTTAGTTGAAGAAGAAAAAGAAAGGCAAGTGTTGGAAGAACAGCAACAAGATGATTCTGCTGAGTCCTCTGTCAACACTAAGCTTTACTTTGGAAATTTGCCGTACAGTGTTGACAGTGCACAACTTGCGGGGTTAATTGAGAGTTATGGAAGTGCAGAACTAATTGAGGTTCTCTATGACAGGGACACTGGAAAAAGCAGAGGCTTTGCATTTGTGACAATGAGTTGCATTGAAGATTGCAATGCAGTAATACAAAATCTTGACGGAAAAGAATTCTTGGGCCGAACTTTACGGGTAAACTTCGCTGACAAGCCAAAACCGAAAGAACCATTGTACCCTGAAACTGAGCATAAGCTATTTGTTGGAAATCTGTCATGGTCAGTAACTTCTGAGAGCCTTACAGAAGCGTTTCAAGAATATGGAACTGTGGTTGGAGCTAGGGTCTTGTATGATGGCGAAACAGGAAGGTCACGCGGCTATGGCTTCGTTTGCTATTCGACAAAGGCAGAAATGGAAGCTGCCCTTACATCTCTGAATGATGTGGAACTAGAGGGACGGGCAATGCGTGTAAGTGTGGCGCAAGGTAAGCGTTCGCAAGGTTAA 861 0.4297 MAATRIASSLFSSSINTTVKNCFASKTITDPPLIAISSNRKLSSLTQCYYFVEPLSLIGVTKLWTPKTSAAVVVSQEEIALSDDAGLVEEEKERQVLEEQQQDDSAESSVNTKLYFGNLPYSVDSAQLAGLIESYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIQNLDGKEFLGRTLRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALTSLNDVELEGRAMRVSVAQGKRSQG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0363 286 Coils Coil 87 107 - -
Ahy9g0363 286 Gene3D - 194 286 IPR012677 -
Ahy9g0363 286 Gene3D - 80 193 IPR012677 -
Ahy9g0363 286 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 87 284 - -
Ahy9g0363 286 SUPERFAMILY RNA-binding domain, RBD 196 283 IPR035979 GO:0003676
Ahy9g0363 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 190 IPR000504 GO:0003723
Ahy9g0363 286 PANTHER TRANSFORMER-2-RELATED 87 284 - -
Ahy9g0363 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 205 274 IPR000504 GO:0003723
Ahy9g0363 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 184 IPR000504 GO:0003723
Ahy9g0363 286 SMART rrm1_1 204 277 IPR000504 GO:0003723
Ahy9g0363 286 SMART rrm1_1 113 186 IPR000504 GO:0003723
Ahy9g0363 286 SUPERFAMILY RNA-binding domain, RBD 98 195 IPR035979 GO:0003676
Ahy9g0363 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 281 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0363 Ahy-Chr9 4249748 4252180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0363 97 282 Eukaryotic Initiation Factors Gene Family AT4G34110 29.851 3.26e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0363 - - adu:107464158 514.227