Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0358 ATGAAAGAAGAGCTTGCTGCGTTGGAATTAAACAAAACTTGGTCTCTTGTTGAGTGTTCCCCAAAGGTGAAACCCATAGGTTGTCGATGGGTGTATAAAATCAAACGTCGTCCAGATGGCTCAATTGAAAGATACAAAGCACGTTTGGTGGCCAAAGGTTTCACACAGACGGAAGGGGTCGATTTTTTGGAGACATTTTCACCAGTTGTCAAACCAGCCACTGTCCGCATAGTTTTGGCTTTAGCTTCTATTAAACAATGGCCAATTCAGCAACTAGACGTCAATAATGCCTTCCTCCATGGCGATTTATCTGAATCGGTACACATGGAGCTGCCACCGGGCCTCTCTTCTAGTCTTCCAAATCAATGTTGCCGTCTCCACAAATCCTTGTATGGGTTGCGCCAGTCTAGTCGAATGTGGTATGAAAAACTCTCCATTCTTCTTCTCTTTTGTGGATATCAACAGACTGTTTTCGATTATAGTCTATTCATTAAGACTGTGGGCAGAGAAATATGTATCTTGTTAATATATGTTGATGATATTGTGGTTACTGGAAATTCCATTTATGAGATTACAACCATTAAGCGGACCTTAGACTCTCATTTTAGGATTAAGGATCTCGGGACTTTAAAATATTTTTTGGGTATTGAGGTGGCTCACTCTAGTAAAGGGATTGCACTTTCACAGCATAAATACTGCTTAGATCTTTTGACTGATTCTGGTCTTTTGGGAGCTAAGCAAATTAGTGTTCCCATGGATAGTGCAACTAAACTTTTTCAAGATGACAGTCCTCTTCTTCCAGATCCCTTTGTTTATCGTCGCTTAGTTGGTCGCTTGATTTATTTAACCACTACTCGCCCGGATATCACTTATGCAACTCAGCAGCTTAGTCAATTTTTAGCTACACCAACTCAAGCTCATTACAAAGCAGCTGTCCGTGTCCTTCGGTATCTTAAGACTAGTCCTGGCAGGGGGCTTTTCTTTCCTCAGATATCATGGAAGACTATAAAACAAACTACTGTAGCCCGTTCTTCTACCGAGGCTGAATATCGTGCTCTTGCTAGTACCACTTCGAATCCAGTTTTTCATGAGCGCACTAAACACTTGGAAGTAGACTGTCATTTGGTTCGTCAGAAGGCTCAAGCTGGGGTAATGAAGTTACTTCCTGTTCCTTCTTCTGGTCAACTTGCAGACATCTTCACAAAGCCTCTTTCTACTCAACTTTTTCACATCAATTTGTCCAAGCTGGGGATTCTTGACATATACCATCCTCCAGCTTGCGGGGATTCCTCTCTTCTTCATGAAGCTAGGCCTTTCCTTATGGGTGATTGGTTGAAGTGGGAATTGGTGAGTATAATTCAATTTGTGATTGGGAAGCGTTTCTACATTGCTGCTGCCAGAGCTCTTAAAAACGGTTCGACAAACATGGATGTTCTAGTTGCTGTAGGAACTACTGCATCTTATGCTTATTCTATTTGTGCTCTTCTATATGGTGCTCTTAATGGATTTAGGGCTCCAGTATACTTTGAAACAAGTGACATGCTCGTAACATTTGTATTGTTGGGCAATTTTATAGATTGTGGACTTCCTGAAAATTCCAACTATACTGAGGAGAGCACCGGAATCAATTACATTTCAGATGCTAATTTTATTGATTCTGGTGTGAGTAAGACTGTGTCGCCCCAAGATAAGACTACTCATCCACAATATTTTACTTATCTTCGAAGTTTCTCTAATGGAATAAGAAATTATTGCAGAATAAATGTAACAAGTGTTACTAGATATTTAATCAGGGCTAGTTTCCTGTACGGAAACTATGATGGTCTTAATAAGCTTCCGGAATTTGATCTTTATCTTGGAATACTAAAAAAGTATAAAGATGATCCATATGACCGGATATGGGAGCCTTATTGGGACGACAGGTGGACACAATTAAGCAGTGGACTTAGCAATGATGGCTTGAATCTGAATAGCTTTAAACCACCAGCAGTTGTGATGGAGACTGCAGCTACACCAAAAAATGCTACTGACTCATTAGACTTCCAGTGGGAGGATGATTATACAGACAACAATGAAACTCAGCACCAATACTATTTCTACTTATACTTCGCTGAGCTTCGGAAGCTGGGTGCAAATCAAACAAGCTCATTCAATATCACCTTAAATGACTCGCCTTGGGCAAGAATGGAACTTGTATACGGTATTACATACACCAGATGTAATTTAAACCCTTGGTTTGGACACAAAAACTATCACATTTCACTTTTCCGGACAGAATCTTCCTCCCTTCCGCCCATCATCAATGCTCTTGAGATTTATTTAGTGAAAGATTTCTCATCACAGTTAGAAACCCAAAAGGATGATGTGGATGCAGTCACAAACATGAAGAGGACTTATAAAGTGGACAGTAGAAACTGGGAAGGAGATCCATGTGCACCCATTGCATACAAGTGGCAAGGTGTAGACTGTACCTCTTATGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGATTGACCGGACATATAGCAGCTGATATATCCAAGCTTACCATGTTAAAGTCCTTAGATTTATCAGACAATGAGTTAAGTGGGACTATTCCTTCTTTTCTGGCACAACTGCAATCACTAGAATACTTGAATTTGGCAAACAACAACCTAACAGGTTCAGTTTCAAACGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCCTTGAGTGTGGGGCAAAATCCCAATCTATGTGCATCAACTTCATGCATCTCGCAATCAAATGATACAAGAAAGAAAGAGAATAATGCAGTTATTGCAGTGGTAACATCAATTGCAGGGATATTACTGCTTCTAGTGATTATAGCCGCAGTTATAATCTTCCGCCAGAGAAAGCAATATGCTGCTGCTAGGAACAGTATTCTTGGGAAGCCTCGTAGTTCAATAAAGGGGTCAGAATTGGAATCGAAGCAACGACAATATTCATTTAATGAGGTTGTTAAGATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTATCATGGCTTTATTGAAGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGTTAAGCTTCTAATGAGAGTACATCATCGAAATCTGACTTCTCTTGTTGGCTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATATATGGCAAATGGAAATTTAGATGAACATCTTTCAGGAAAAAACAACAGGGGAACGTCCTTGAATTGGGAAGATAGACTTCAAATAGCATTAGATGCCGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCCATAATTCACATAGATGTAAAATGCACAAATATTCTATTAAATGAAAACTTCCATGCCAAACTTGCTGATTTTGGATTGTCCAAATGTTTTGTGACTGACGGGGATACACATGTATCGACAATTGTAGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCCAACAGATTGACAGAAAAAAGCGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGATAATAGTAAGAGAAGACATGATTCATCATATAAGTCAACGGGTTAATTCCATGGTTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTACCATTTCGATGGAAAGGCCATACATGAGTGATATAGTGAAAGAGCTAAAGGAGTGTTTGGCTGCAGAGTTAGCCCGAGAACATAACAGTTGTGACCTTCAAAATAAAGATTTATTTGGGCAGGTTAGTCTGAACTTGATTAGTACTGATATCACTCCCTTAGCTAGGTAG 3945 0.3985 MKEELAALELNKTWSLVECSPKVKPIGCRWVYKIKRRPDGSIERYKARLVAKGFTQTEGVDFLETFSPVVKPATVRIVLALASIKQWPIQQLDVNNAFLHGDLSESVHMELPPGLSSSLPNQCCRLHKSLYGLRQSSRMWYEKLSILLLFCGYQQTVFDYSLFIKTVGREICILLIYVDDIVVTGNSIYEITTIKRTLDSHFRIKDLGTLKYFLGIEVAHSSKGIALSQHKYCLDLLTDSGLLGAKQISVPMDSATKLFQDDSPLLPDPFVYRRLVGRLIYLTTTRPDITYATQQLSQFLATPTQAHYKAAVRVLRYLKTSPGRGLFFPQISWKTIKQTTVARSSTEAEYRALASTTSNPVFHERTKHLEVDCHLVRQKAQAGVMKLLPVPSSGQLADIFTKPLSTQLFHINLSKLGILDIYHPPACGDSSLLHEARPFLMGDWLKWELVSIIQFVIGKRFYIAAARALKNGSTNMDVLVAVGTTASYAYSICALLYGALNGFRAPVYFETSDMLVTFVLLGNFIDCGLPENSNYTEESTGINYISDANFIDSGVSKTVSPQDKTTHPQYFTYLRSFSNGIRNYCRINVTSVTRYLIRASFLYGNYDGLNKLPEFDLYLGILKKYKDDPYDRIWEPYWDDRWTQLSSGLSNDGLNLNSFKPPAVVMETAATPKNATDSLDFQWEDDYTDNNETQHQYYFYLYFAELRKLGANQTSSFNITLNDSPWARMELVYGITYTRCNLNPWFGHKNYHISLFRTESSSLPPIINALEIYLVKDFSSQLETQKDDVDAVTNMKRTYKVDSRNWEGDPCAPIAYKWQGVDCTSYDGFLRITSLNLSSSGLTGHIAADISKLTMLKSLDLSDNELSGTIPSFLAQLQSLEYLNLANNNLTGSVSNELLQKQSDGLLSLSVGQNPNLCASTSCISQSNDTRKKENNAVIAVVTSIAGILLLLVIIAAVIIFRQRKQYAAARNSILGKPRSSIKGSELESKQRQYSFNEVVKMTNNFDRILGRGGFGTVYHGFIEDIQVAVKMLSLSSVHGYQQFVAEVKLLMRVHHRNLTSLVGYCNEETNIGLIYEYMANGNLDEHLSGKNNRGTSLNWEDRLQIALDAAQGLEYLHNGCKPPIIHIDVKCTNILLNENFHAKLADFGLSKCFVTDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVIIVREDMIHHISQRVNSMVAEGDITKVVDSRLQGDFDSNSAWRAVEIAMASVSTISMERPYMSDIVKELKECLAAELAREHNSCDLQNKDLFGQVSLNLISTDITPLAR* 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0358 1314 Pfam Malectin-like domain 525 621 IPR024788 -
Ahy9g0358 1314 Pfam Malectin-like domain 624 774 IPR024788 -
Ahy9g0358 1314 CDD RNase_HI_RT_Ty1 331 407 - -
Ahy9g0358 1314 Gene3D Transferase(Phosphotransferase) domain 1 1079 1298 - -
Ahy9g0358 1314 ProSiteProfiles Protein kinase domain profile. 1004 1267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0358 1314 SUPERFAMILY Protein kinase-like (PK-like) 985 1274 IPR011009 -
Ahy9g0358 1314 ProSiteProfiles Leucine-rich repeat profile. 879 901 IPR001611 GO:0005515
Ahy9g0358 1314 PANTHER OS07G0107800 PROTEIN-RELATED 624 1314 - -
Ahy9g0358 1314 PANTHER OS07G0107800 PROTEIN-RELATED 525 620 - -
Ahy9g0358 1314 SUPERFAMILY L domain-like 815 916 - -
Ahy9g0358 1314 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 11 252 IPR013103 -
Ahy9g0358 1314 Gene3D Ribonuclease Inhibitor 786 907 IPR032675 -
Ahy9g0358 1314 Pfam Protein tyrosine and serine/threonine kinase 1006 1272 IPR001245 GO:0004672|GO:0006468
Ahy9g0358 1314 SMART serkin_6 1004 1267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0358 1314 PANTHER PUTATIVE-RELATED 525 620 - -
Ahy9g0358 1314 SUPERFAMILY DNA/RNA polymerases 12 374 IPR043502 -
Ahy9g0358 1314 PRINTS Leucine-rich repeat signature 877 890 - -
Ahy9g0358 1314 PRINTS Leucine-rich repeat signature 856 869 - -
Ahy9g0358 1314 Gene3D Phosphorylase Kinase; domain 1 991 1078 - -
Ahy9g0358 1314 ProSitePatterns Protein kinases ATP-binding region signature. 1010 1031 IPR017441 GO:0005524
Ahy9g0358 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1125 1137 IPR008271 GO:0004672|GO:0006468
Ahy9g0358 1314 PANTHER PUTATIVE-RELATED 624 1314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0358 Ahy-Chr9 4154920 4173068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0358 525 620 Receptor kinase-like Gene Family AT1G51850 45.361 1.01e-17 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy9g0358 PK_Tyr_Ser-Thr 1.90E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0358 - - ahf:112708723 2617.8