LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g0339	ATGGCTGATGACTTGCTTGATGAACTCTCCACCAAAGCCTCCACTGCTGCACCAAGGGATCCAGGTAACTCTAATGACTGGTCTCGCCCTGTTGATTCAATTATTGAAGATAGTGGTGTCAATGTCATTGAAAAAATAGTTGCCAAACTAGAGTCTGTTGTAGGACGAAAAGGTAAACTTCGTCTAAGAGAGAGTGCCAAGGTGGACTTCTCATCATGGAGAATTCCATCCACATCCCTTGTTATAAGTTCTGACGTATTTGGTCGTGATGAAGAAAAGGAGAAGATAATCAAATTGCTGTTAGATGATACCTGCGATGCTGAATCGCGTGTGACTGTGATCCCCATCGTGGGAATGGGCGGAATAGGAAAAACTACTTTGGCTCAACTGGTTTACAATGATGCCAAAGTCGTTGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATTCTGACCCTATTAATGTTACAAGGACAATAATAGGGGCACTAAATTCTTCTCCCTGTACCATGGATAATTTTGATTCACTTCAGACTGTTTTGATGAAAAAGTTGACAGGAAAGACATTCTTAATTGTTTTAGATGATGTCTGGGACGATCGACGAGACATGTGGGAGGATTTTCTAAAACCTTTTTGGTTTGGGAATAATGGAAGTAAGATTCTCTTAACAACCCGCAGTGAAAATGTTGCTTCTGTGTTTGCAGCTAACAATCTATATCATCGACTAAGTTTATTGTCGGAGGAAGATTGTTGGTCAATGTTTTTGAAGCATTCATCTATTTCTTCTAGTTCTAAACAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAATGTAAGGGGCTACCTTTGGCTGTAAAGACACTTGGGGGTTTATTGCGTAATAAGTATAATGAAGTGGATTGGGAGAATACACTTGAATGTGAAATTTGGGAACTCTCGGAAGTTGACTGTAAGATTGTTCCTGCATTAAGAGTTAGTTATTATTATCTCCCTTCACATTTAAAGCGGTGTTTTGTTTATTGTTCATTATATCCCAAGGGTTATGAATTTGACAAAGAAGAATTAATTTTGTTATGGATGGCCGAAGATCTTTTACGACCAAAGAAAGCTAACACATTAGAAATGACTGGTTGTACATATTTTGATGAATTAGTTGCGAGGTCTTTTTTCCAACCTTCCAATACTAATGGAAAGTTGTTTGTAATGCATGATCTCATGCATGATTTAGCAACACTTTTTGCTGGGAAATTCTATTTCAAACTCACAGAATTTGGCAATCAACACATGATAGATAACAAAACTCGTCATTTATCAAATACTAGAGCATTCGTTGATAGCATCGAATTAATTCGAGAGGCTGAAGCAATACACATGAGAACATTTTTAGATTTTTCTTTGCTTGCCTATTGTGATTCAGTTAATTTTCAAAGATTTCTACAACATTTGGGATGTTTAAGAGTTTTGTCATTCAAAAATCTCTCTCTAGAGTCATTACCCGATTCAATAGGTGAACTGATTCATTTGCGTTATTTGGATCTCTCTTACATATATTCTATGACATTGCCTGAGTCCATCTTTAAATTGTACAATCTCCAAACTTTGAAGTTGAGGAATTGTCATATGCTTAAGATGCTTCCAAGCCGCATGCAAGAGCTTGTGAACCTGCGGCACCTTGATATTCGAGGTTCTTCTGATCTAGAAGAGATGCCAAAGAAAATGAGCAAGTTAAAGCATCTAAATTTCTTAACTGATTATATTGTCGGCAAGCACGAAGAGAATGGGATAAGAGAATTGGGACCACTGGACAACCTTCATGGCTCATTTTGCATTTCCAACTTGGAGAACGTGAAGAATAGTGTTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGTACATCAACACTTTAAAATTCAAATGGCTTCCAAATGGTGACAATGATGACGTTGAAACCGAAAGAGATATTCTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTATCAATTAAGGGTTATCCGGGTGAAAGATTCCCAGATTGGTTAGGCCTTTGTTGCTACTCCAATATGACCAAATTGAGTCTGGATAGTTGTATAAATTGTTGTGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATCTGGAGATTTCTAAACTTGATGGGTTGGAGAAAATTGATTCTGAGTTCTACAACAAAAACAATGCATCATTTCAGGAGAAGACACCCTTCAGATCTCTTGAAACTCTGAAAATTGAGTATATGTATAGTTGGCGGGAGTGGCATTTTCCTGATGAGTTTGATGGTTTTCCTCAGCTTAGAATCCTTGAAATAAGAAGCTGTCCGGTGTTAAGAGGAGATCTGCCTGCTCACCTTCCGGCTCTGGAGGAACTTATCATTGTTGGATGTGAAGAGCTTGCATGTTCGCTGCCAAGGGCTCCCAAGCTTCACGAATTACATGTGCTGAATTCTGGTTTTTATACGGATGCGACCACGCACAATGTAGACATCACAGGAACCCAGCTGGCGAAGTCCGTATTGGAGTGGCTGCCCCACATCCAACCGCCACGCGTCCAACATCTGTTTATCAGTCACTGTTATTCAGCCATATCAATTTCAGCAGATTATGTGCCTGCTTCGTTACAATATCTTGTCATCTGTGATTGTCCAAAATTAACATTCTCAGAGCAACTGCACCACAAGTCACTAACGGAGATAGATGTGTACGATTGTGATTCACTGACGTTGTTTCCATTGGGGGCCCTTCCAAATCTCAAGAAACTCGCAATCCGTGGATGCAAAAACATGGAATATGTTGAGATGCCACAGACTCTTCCAAGTCTCTGTTATATATGGATCACAGAATGTCCCGGTTTAGTATCCCTGCCGGCTCTAGCGTTGGCTGTTCCCCACCTACAGGAGCTGTATATACGCAATTGCCCAGAAATCAATTGTTTTGCTGGGGAGTGCCTCCCGCCGAGTCTGAAAACTCTTCAAGTTGTTAAGTGCCAGAAACTAGAGAGGTGGATAACATCACAGGGTTTGCAGAGTCAAGGCCTTACCCGTCTAATCCTTCACGAATGGAATGAAGTTAAGTCGTTCCCAGGAGAGGGTTCACTTCCTGCTTCTCTTGTGTGTCTAAAATTGTCTACATTCTCAAATCTGGAGACGCTTGATTGCAAGGGGCTTCACCATCTTACCTCCCTCAAAAATTTAGCAATTCGTAACTGTAGAAAGCTTGAGAATATCACAGAAGAACATTTGCTTGCCTCCATAGAAAATATTTACTTAGGGGAAGAATGTCCTTTGAGGCGTAAGTTGGAAGAGATGGAAGACCCACATATTCAATTCGTTACAGATTTGCCCTCATGGAAGATTGAAGAGTCAACATAA	3414	0.3995	MADDLLDELSTKASTAAPRDPGNSNDWSRPVDSIIEDSGVNVIEKIVAKLESVVGRKGKLRLRESAKVDFSSWRIPSTSLVISSDVFGRDEEKEKIIKLLLDDTCDAESRVTVIPIVGMGGIGKTTLAQLVYNDAKVVGKFDTRAWVCVAENSDPINVTRTIIGALNSSPCTMDNFDSLQTVLMKKLTGKTFLIVLDDVWDDRRDMWEDFLKPFWFGNNGSKILLTTRSENVASVFAANNLYHRLSLLSEEDCWSMFLKHSSISSSSKQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEVDWENTLECEIWELSEVDCKIVPALRVSYYYLPSHLKRCFVYCSLYPKGYEFDKEELILLWMAEDLLRPKKANTLEMTGCTYFDELVARSFFQPSNTNGKLFVMHDLMHDLATLFAGKFYFKLTEFGNQHMIDNKTRHLSNTRAFVDSIELIREAEAIHMRTFLDFSLLAYCDSVNFQRFLQHLGCLRVLSFKNLSLESLPDSIGELIHLRYLDLSYIYSMTLPESIFKLYNLQTLKLRNCHMLKMLPSRMQELVNLRHLDIRGSSDLEEMPKKMSKLKHLNFLTDYIVGKHEENGIRELGPLDNLHGSFCISNLENVKNSVEALEAKMGNKKYINTLKFKWLPNGDNDDVETERDILDKLQPHQNLKELSIKGYPGERFPDWLGLCCYSNMTKLSLDSCINCCELPSLGQLPSLQHLEISKLDGLEKIDSEFYNKNNASFQEKTPFRSLETLKIEYMYSWREWHFPDEFDGFPQLRILEIRSCPVLRGDLPAHLPALEELIIVGCEELACSLPRAPKLHELHVLNSGFYTDATTHNVDITGTQLAKSVLEWLPHIQPPRVQHLFISHCYSAISISADYVPASLQYLVICDCPKLTFSEQLHHKSLTEIDVYDCDSLTLFPLGALPNLKKLAIRGCKNMEYVEMPQTLPSLCYIWITECPGLVSLPALALAVPHLQELYIRNCPEINCFAGECLPPSLKTLQVVKCQKLERWITSQGLQSQGLTRLILHEWNEVKSFPGEGSLPASLVCLKLSTFSNLETLDCKGLHHLTSLKNLAIRNCRKLENITEEHLLASIENIYLGEECPLRRKLEEMEDPHIQFVTDLPSWKIEEST*	1138

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g0339	1137	PANTHER	DISEASE RESISTANCE PROTEIN RP	872	1089	IPR044974	GO:0006952
	Ahy9g0339	1137	MobiDBLite	consensus disorder prediction	1	30	-	-
	Ahy9g0339	1137	PRINTS	Disease resistance protein signature	556	572	-	-
	Ahy9g0339	1137	PRINTS	Disease resistance protein signature	284	298	-	-
	Ahy9g0339	1137	PRINTS	Disease resistance protein signature	186	200	-	-
	Ahy9g0339	1137	PRINTS	Disease resistance protein signature	113	128	-	-
	Ahy9g0339	1137	SUPERFAMILY	L domain-like	407	829	-	-
	Ahy9g0339	1137	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	72	347	IPR027417	-
	Ahy9g0339	1137	Gene3D	Ribonuclease Inhibitor	456	836	IPR032675	-
	Ahy9g0339	1137	Gene3D	-	70	240	IPR027417	-
	Ahy9g0339	1137	Gene3D	-	332	417	IPR036388	-
	Ahy9g0339	1137	MobiDBLite	consensus disorder prediction	16	30	-	-
	Ahy9g0339	1137	SUPERFAMILY	L domain-like	863	1105	-	-
	Ahy9g0339	1137	Gene3D	Ribonuclease Inhibitor	837	1122	IPR032675	-
	Ahy9g0339	1137	PANTHER	DISEASE RESISTANCE PROTEIN RP	3	802	IPR044974	GO:0006952
	Ahy9g0339	1137	Gene3D	-	247	331	IPR042197	-
	Ahy9g0339	1137	PANTHER	OS05G0414200 PROTEIN	3	802	-	-
	Ahy9g0339	1137	PANTHER	OS05G0414200 PROTEIN	872	1089	-	-
	Ahy9g0339	1137	Pfam	NB-ARC domain	90	311	IPR002182	GO:0043531

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g0339	Ahy-Chr9	3875562	3924700	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g0339	111	593	WRKY Transcription Factor Family	AT5G45050	22.323	4.70e-13	72.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g0339	-		-	ahf:112708719	1565.05