Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0318 ATGGGAAAAGCTACAAGGTGGTTGAAGGGGCTATTAGGAATGAAAAAGGAGAATAAAGAGAATAGTAATAAGGATCAACACCACATTGAAAATTCAGGGTCATTGCCAACAATAACATCAGCAATGGCTTCTTCTTTTTCTTCTTCTTATGACAAGAAAGAGAAGAAAAGATGGAGTTTTGCTAAGCAAGTAGAGAAGGATAATAATAATGATAATAATAGAAACATTGTTGCTCCTTCCAATGGTGCAGCTTTGGATTCTTCTTCTTCTGATGGTGCTTGGATTAGATCCTATATTGCTGACACTGAGAGTGAGCAGAACAAGCATGCAATTGCTGTGGCAGCTGCCACTGCCGCGGCTGCAGATGCCGCCGTGGCAGCTGCGCAGGCGGCCGTGGCAGTTGTTAGGCTGACAAGCCAAGGGAGAGGCACATTGTTCAGTGGCAGCAGAGACAAGTGGGCTGCTGTAAAAATCCAAACTTTCTTCAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGTTTTCTAGTTAGAAAGAGGGCTGCCGCAACTCTTCACAGTATGCAGGCTCTAATTCGAGCTCAGGCCGCCGTCCGGTCGCAGCGTGCCCGCCGTTCCATGAGCAAGGACAATAGGTTCCTCCCTGAAGTTCTTGCAAGAAAATCTCTGGAACGATTTGATGAAACAAGAAGTGAATTCCACAGCAAAAGGATGATACCTACATCATATGAAGCATCAATGAATGGATTTGATGAGTCTCCAAAAATTGTTGAAATTGACACTTACAAGACTAGATCATCAAGGTCAAGGCGTTACACCTCTACAATGTCCGAATGTGGCGAAGATCCGCCATACCACGCTGTCTCATCCCCTCTTCCCGGCCGAATCTCGGTCCCAGATTGCCGGCACCTTCAAGATTTCGATTGGTACTTGAGTGCCGACGAATGTAGGTATTCGACGGCACACAACACTCCAAGATTTGCAAACTACGCGCACCCTAAAATCGCCCCGGCCACGCCGGCTAAAAGTGTGTGTGGAGGGGACACATTTTTTAGGCCTTATTCAAATTTTCCAAATTACATGTCAAATACTCAATCTTTTAATGCAAAATTAAGGTGTCATAGTGCTCCAAAGCAAAGGCCTGAGCCAAAGAAGAGGCTTTCACTCAATGAAATGATGGCAGCAAGGAACAGCATAAGTGGTGTTAGAATGCATAGGCCATCCAATTTTCAAGGTCAAGAATCATGGAATTTTTGA 1293 0.4486 MGKATRWLKGLLGMKKENKENSNKDQHHIENSGSLPTITSAMASSFSSSYDKKEKKRWSFAKQVEKDNNNDNNRNIVAPSNGAALDSSSSDGAWIRSYIADTESEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSRDKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRARRSMSKDNRFLPEVLARKSLERFDETRSEFHSKRMIPTSYEASMNGFDESPKIVEIDTYKTRSSRSRRYTSTMSECGEDPPYHAVSSPLPGRISVPDCRHLQDFDWYLSADECRYSTAHNTPRFANYAHPKIAPATPAKSVCGGDTFFRPYSNFPNYMSNTQSFNAKLRCHSAPKQRPEPKKRLSLNEMMAARNSISGVRMHRPSNFQGQESWNF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0318 430 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 420 - -
Ahy9g0318 430 MobiDBLite consensus disorder prediction 10 27 - -
Ahy9g0318 430 Pfam IQ calmodulin-binding motif 153 172 IPR000048 GO:0005515
Ahy9g0318 430 Pfam IQ calmodulin-binding motif 178 192 IPR000048 GO:0005515
Ahy9g0318 430 MobiDBLite consensus disorder prediction 63 84 - -
Ahy9g0318 430 SMART iq_5 173 194 IPR000048 GO:0005515
Ahy9g0318 430 SMART iq_5 150 172 IPR000048 GO:0005515
Ahy9g0318 430 ProSiteProfiles IQ motif profile. 199 228 IPR000048 GO:0005515
Ahy9g0318 430 ProSiteProfiles IQ motif profile. 151 179 IPR000048 GO:0005515
Ahy9g0318 430 Gene3D - 93 176 - -
Ahy9g0318 430 Pfam Protein of unknown function (DUF4005) 331 413 IPR025064 -
Ahy9g0318 430 MobiDBLite consensus disorder prediction 1 36 - -
Ahy9g0318 430 ProSiteProfiles IQ motif profile. 175 202 IPR000048 GO:0005515
Ahy9g0318 430 PANTHER IQ-DOMAIN 5-RELATED 1 420 - -
Ahy9g0318 430 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0318 Ahy-Chr9 3626419 3631237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0318 1 416 IQD Protein Family AT3G16490 50.580 7.17e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0318 - - adu:107463958 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0195 18 1529464 1531265 Ahy9g0318 9 3626419 3631237 PCT
Ahy9g0318 9 3626419 3631237 Ahy18g0195 18 1529464 1531265 PCT