Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0263 ATGGGTGATTTGATAACCATTGTCTATCATCACGGAGGCAACTTTGTTACAAAAAATGATGGCAATGTAGTTTACGAAACGGACAATACGGATGAATTAACTGGACTAAATGAAGATAGATTGGATGTATTTTCACTAAGGAATTACTACAAGGAGCTAATGCAAATGCAAATGCACCCGATGATGATGAAAAATTATCTAATGACATTTGTTTTCCATCCTGGTGGAAAGTTTAAAAATGATGAAAGTGGATCAAAAATTTATGAACCAGACAATACAAAGGTGTTAGCGGGAGTTGAAGGGGATATGCTAGATGTTTTCTTCGAAAAAGGATATTACAAGAAGGTAGGATATTCAAAGGTAGATAGTTGTTGCTGGAAAGTACCCGAAATATCGCTTGAAGTTGGGTTGAGGAAGCTAGAAGTATATGCTGATTTGTTGAAAATGGAGGATAATGATTCTCATGATTCGTACGAGAGTACTGAAGATAGTCTCTATAAGCCTCCAAACATTTTGGGAAATGGATATAAGAGTTCTAGTGATAGTGATAATGGGGTTGTTGCTATCAAGAATTCATATTCAAAGAAACATGAAAATAAGGAGAAGTCTAGGCCTGCATCTCACAGATCCACTGATAAGGCAATTGATACGGATAACTCTAATTATGAGGATATTGAAGACAATGAGATATCGAATTCAGGATCAGAAAGAGCTAGAGAGAGCGTATACCGTATCCTTCCTTTATTCACTTCTACTACTTATACCCTTCTCTTCTTCTCTCTTTTCAGTTTACTCTTTCTCTTCTCTTCTTCTAGTTCCACAATGACACAAACAACTTCATCATCTTCATCTTCTTCTTCTTCAGAAACATCTACTACCAGCACCATTTCACCACCACCCTCACCTTCACCCTCCTCATCTTCTTCTTCTTCCAAGAAGCAAAAAACAGAGCATGCCAACAAGGACCCCAAGAGACCAAGAGACTGCAGCAAGCACCCCCTCTACCATGGCGTCCGCAAGCGCAATTGGGGCAAATGGGTCTCCGAAATCCGCGAGCCTCGCAAGAAATCTAGGATTTGGCTTGGAACTTTCGCCACGCCGGAGATGGCTGCCAGAGCACACGACGTCGCCGCCTTGTCCATCAAAGGCCAGTCCGCCATCCTCAATTTCCCCGAACTCGCCGGGACACTCCCTCGTTCCGTCACGTGTTCCCCACGTGACATTCAGGCTGCAGCCACAGCCGCAGCCTCCATGGTCAAATTTGACTCTATTGCTGCTGCGGAACAGCCTCAGCACCACCCAGACACGTCTGATGATGCTGAGACTTGCTCGCAGCAGCAAGAGGCAGAACCATCGTCATCATTGTCAATGTCTAGAGAGACGGATTCGTCTGAACTGAGCGAGATAGTTGAGCTTCCGAACATTGAAGATGATGAAGGGTTTGACTCGGTTGAGTCATCAAGGAGCGAGTTCATGTGGTTCGACATGGTCGATAACTGCAATGGTTGGGTGTATGATCCTCCAATGGGGTTAGAGGGTGCTGAATTCTGCGCAAATTTCATTGCTGATAGTAACTCTTTGATACCCATTTGGGATGATTGA 1602 0.4351 MGDLITIVYHHGGNFVTKNDGNVVYETDNTDELTGLNEDRLDVFSLRNYYKELMQMQMHPMMMKNYLMTFVFHPGGKFKNDESGSKIYEPDNTKVLAGVEGDMLDVFFEKGYYKKVGYSKVDSCCWKVPEISLEVGLRKLEVYADLLKMEDNDSHDSYESTEDSLYKPPNILGNGYKSSSDSDNGVVAIKNSYSKKHENKEKSRPASHRSTDKAIDTDNSNYEDIEDNEISNSGSERARESVYRILPLFTSTTYTLLFFSLFSLLFLFSSSSSTMTQTTSSSSSSSSSETSTTSTISPPPSPSPSSSSSSSKKQKTEHANKDPKRPRDCSKHPLYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQSAILNFPELAGTLPRSVTCSPRDIQAAATAAASMVKFDSIAAAEQPQHHPDTSDDAETCSQQQEAEPSSSLSMSRETDSSELSEIVELPNIEDDEGFDSVESSRSEFMWFDMVDNCNGWVYDPPMGLEGAEFCANFIADSNSLIPIWDD* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0263 533 MobiDBLite consensus disorder prediction 192 237 - -
Ahy9g0263 533 MobiDBLite consensus disorder prediction 276 296 - -
Ahy9g0263 533 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 297 514 - -
Ahy9g0263 533 Gene3D AP2/ERF domain 334 392 IPR036955 GO:0003700|GO:0006355
Ahy9g0263 533 MobiDBLite consensus disorder prediction 440 463 - -
Ahy9g0263 533 MobiDBLite consensus disorder prediction 427 481 - -
Ahy9g0263 533 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 297 514 - -
Ahy9g0263 533 PRINTS Ethylene responsive element binding protein signature 357 373 IPR001471 GO:0003700|GO:0006355
Ahy9g0263 533 PRINTS Ethylene responsive element binding protein signature 335 346 IPR001471 GO:0003700|GO:0006355
Ahy9g0263 533 MobiDBLite consensus disorder prediction 314 334 - -
Ahy9g0263 533 MobiDBLite consensus disorder prediction 193 220 - -
Ahy9g0263 533 SUPERFAMILY DNA-binding domain 334 392 IPR016177 GO:0003677
Ahy9g0263 533 Pfam AP2 domain 333 383 IPR001471 GO:0003700|GO:0006355
Ahy9g0263 533 SMART rav1_2 334 397 IPR001471 GO:0003700|GO:0006355
Ahy9g0263 533 ProSiteProfiles AP2/ERF domain profile. 334 391 IPR001471 GO:0003700|GO:0006355
Ahy9g0263 533 MobiDBLite consensus disorder prediction 276 334 - -
Ahy9g0263 533 CDD AP2 333 393 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0263 Ahy-Chr9 2945085 2965647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0263 305 510 AP2-EREBP Transcription Factor Family AT5G11590 54.369 1.29e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy9g0263 AP2 4.10E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0263 K09286 - ahf:112712788 932.939