Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0233 ATGGGAATGGACATGTCTTCAAACACCAATAAGGACTTGTTCTCCTCTCCAACTCTCTCCCTCACCCTTGCTGGGATTTTTAACAACCAAGTAGAGGAAGTAGGGGATGAGGGAAGTAGAGAGTGTTCAAGGAAAGAGGACACCACCACCACCACCACCGTTGATGTAAGCAGCGAGAATTCTGGGCCGTTGAGATCAAGATCAGAGGATGATGATGATGATGGTGATGATGACGATGGGAGCAAGAAGAAGAAGAAAAGAAGGAAGTATCATAGGCACACCGCTGAGCAGATCAGAGAAATGGAAGCGGTTTTCAAAGAATCTCCCCATCCAGATGAAAGCCAAAGGAAACAACTGAGCAAGCAATTAGGCCTTGCTCCAAGTCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAGTTCGTTGTTGAAGAAAGAAATAGAGAAATTAATGGAGGAAAATAAGGCCATGAGAGAGGCCATAAGCAAATCTTGTTGCCCTAACTGTGGCATGGCCATGGCCACCACTTCTACTATCACTGATGATAGCTCCACCATCTCCATTGAAGAACAACAACTTCGTTTAGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTACGAGAAGTTTCAGGGAAATACCCATCAGCTGGAACAATAATGTACCCTTCATGTTCTACTAGCCATGAGCAAGTAGATAATAATAGAATAAACTCATCAATGGATTTTTACAATGGAATTTTTGGGGTTGAAAAATCAAGGATAATGGAGATAGTGAACCAAGCAATAGAGGAACTCATAAAGATGGCTACTATTGGAGAACCTTTATGGGTACGTAGTGTTGAAACTGGTAGAGAAATACTCAACTATGATGAATATGAGAAGGTTTTTGAGGTTCACAATAATTCAAGAATTATTGGAAGAAGGTCAAACACGTCCATTGAAGCATCAAGAGAAAATGGAATTGTTTTTATGGATCTATCAAGTCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATATCAAAGGCTGCAAATGTTGATGTTATATGCAATGGAGAAGGATCTAATCGCAATGGTGTTGTTCAACTGATGTTTGCTGAGTTGCAAATGCTGACACCAATGGTGCCAACAAGAGAAGTATATTTCGTGAGATGCTGCAGAAAGTTAAGTGATGAAAAGTGGGGAATTGTTGATGTTTCCATAGACAAAGTAGAAGACAACATCGATGCTTCCCTTCTTAAATGCAGAAAACGCCCTTCTGGTTGCATTATTGAAGATAAGTCTCATGGTCATTGCAAGGTAAGTTGGGTGGAACACTGGGAATGCGAGAAAAGCAGTGTCCACAGAATGTATAGAAGCATTGTGAATAACGGTACAGCGTTTGGGGCAAGGCACTGGATATCAACACTGCAGCTTCAATGTCAACGTCTTGTTTTCTTCATGGCAACTAATGTTCCCATCAAGGATTCAACTGGTGTTGCCACATCAGCTGGAAGAAAGAGCATATTGAAGTTAGGAGAAAGAATGAGATGGAGTTTTTGCCATGCAATTGGAGCCTCAAGCTTCCATACATGGACAAAGGTGACAAGTAAAAATGGAGAAGACATTAGGATCAGTTCTAGGAAGAACTTGAATGATCCTGGTCAACCTCTTGGTGTCATCCTATCAGCTGTTTCTTCTGTGTGGCTTCCTCTCCCTCCAAATGTTCTTTTTCATTTCTTGAGGGATGAAAATCATAGGTCTCAGTGGGATATCATGGTCACTGGTGGGTCATCGGTGCAGTCCATAGCAACATTAGCCAAAGGCCAAGATCGGGGCAATGCTGTAAATATCCATGAGATTACATCAAAAGAAAACATCAAGTGGTGGATATTACAAGATAGCTCCACAAATGCTTATGAATCAATGGTAGTGTATGCTCCTGTGGACATTCCTAGCATGAAGAATGTGATGAATGGATGTGATTCAACCAACATTCCAATATTACCATCAGGGTTCTCAATTCTCCCTGATGGGGTTGATTCAAGGCCATTGATTACTTCTACTACTATGATGCAACAACAACAAGAAGAAAATATGAATACTGAAGAAGGAGGAGGATCTTTGTTAACAATGGCATTCCAAGTAATTACTAATAATAATAGTAATGGTTCTCCATCATCAGCAAAATTGACTTTGGAGTCTGTGGAATCAGTCAAGAGTTTAGTTTCTTGTACATTAAGGAATATCAAATCATGTTTACAATGTGAAGAAGATTGA 2313 0.4038 MGMDMSSNTNKDLFSSPTLSLTLAGIFNNQVEEVGDEGSRECSRKEDTTTTTTVDVSSENSGPLRSRSEDDDDDGDDDDGSKKKKKRRKYHRHTAEQIREMEAVFKESPHPDESQRKQLSKQLGLAPSQVKFWFQNRRTQIKAIQERHESSLLKKEIEKLMEENKAMREAISKSCCPNCGMAMATTSTITDDSSTISIEEQQLRLENAKLKAEVEKLREVSGKYPSAGTIMYPSCSTSHEQVDNNRINSSMDFYNGIFGVEKSRIMEIVNQAIEELIKMATIGEPLWVRSVETGREILNYDEYEKVFEVHNNSRIIGRRSNTSIEASRENGIVFMDLSSLVQSFLDVNQWKEMFPCLISKAANVDVICNGEGSNRNGVVQLMFAELQMLTPMVPTREVYFVRCCRKLSDEKWGIVDVSIDKVEDNIDASLLKCRKRPSGCIIEDKSHGHCKVSWVEHWECEKSSVHRMYRSIVNNGTAFGARHWISTLQLQCQRLVFFMATNVPIKDSTGVATSAGRKSILKLGERMRWSFCHAIGASSFHTWTKVTSKNGEDIRISSRKNLNDPGQPLGVILSAVSSVWLPLPPNVLFHFLRDENHRSQWDIMVTGGSSVQSIATLAKGQDRGNAVNIHEITSKENIKWWILQDSSTNAYESMVVYAPVDIPSMKNVMNGCDSTNIPILPSGFSILPDGVDSRPLITSTTMMQQQQEENMNTEEGGGSLLTMAFQVITNNNSNGSPSSAKLTLESVESVKSLVSCTLRNIKSCLQCEED* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0233 770 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Ahy9g0233 770 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 12 768 - -
Ahy9g0233 770 SMART START_1 267 494 IPR002913 GO:0008289
Ahy9g0233 770 CDD START_ArGLABRA2_like 262 493 - -
Ahy9g0233 770 MobiDBLite consensus disorder prediction 49 63 - -
Ahy9g0233 770 MobiDBLite consensus disorder prediction 32 97 - -
Ahy9g0233 770 Coils Coil 198 220 - -
Ahy9g0233 770 CDD homeodomain 91 142 IPR001356 GO:0003677
Ahy9g0233 770 Pfam START domain 268 494 IPR002913 GO:0008289
Ahy9g0233 770 Coils Coil 143 173 - -
Ahy9g0233 770 SUPERFAMILY Bet v1-like 514 692 - -
Ahy9g0233 770 SUPERFAMILY Bet v1-like 261 494 - -
Ahy9g0233 770 SUPERFAMILY Homeodomain-like 75 145 IPR009057 -
Ahy9g0233 770 ProSiteProfiles START domain profile. 258 497 IPR002913 GO:0008289
Ahy9g0233 770 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Ahy9g0233 770 Gene3D - 73 161 - -
Ahy9g0233 770 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 12 768 IPR042160 -
Ahy9g0233 770 Gene3D - 271 494 IPR023393 -
Ahy9g0233 770 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Ahy9g0233 770 MobiDBLite consensus disorder prediction 34 48 - -
Ahy9g0233 770 SMART HOX_1 86 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0233 Ahy-Chr9 2666410 2680780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0233 56 769 Homeobox Transcription Factor Family AT1G79840 59.673 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy9g0233 START 1.70E-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0233 K09338 - qsu:111988083 1016.91