Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0113 ATGGAGGAGTCAGGGGAAAATTGGCCTTCGGATTCTGATTTGGAAATGGGTGATGACAATAATAATGATTATTGTTATGATGATGAAGAAGAATTGGGTTGTGATGAAGAGATTCAATATTTTGCTGAAGAAGCTTTAGATCCTATTATGGATGAGACTCAAAGGAAGAAGAAACAAAGGGAACTTGAAGAGAGATTGCTTGCACTTTCAGCCACCATACCCAGTAGTGGCTTCAAGAATAACAAGATGGACGATAGATCAATCCTTGACAATGCTAGCAACTACGTGAAACAACTCCAACAACGTGTGAGGGAGCTAGAACAAGAAGTTGGTGGTGGATCCAACAGTAACAAAGGTTCCACGTCTTATAATAACGAAGAAGTAAACTCTTATAATAGTAACAATAATTGTGATGAATTGTATTATGGAGAAGGTGGTGGCAATAATATTAATCTTCCTGAGGTCAAAGTAAGAGTGTTGCAAAACGAAGTGCTCATCATAATCCATTGCGAGAAACAAAAGGGTTTGATGCTCAAAATTCTAACAAAGCTTGAGAATCTTCATCTTTTGGTTCTCAATAACAGTGTCTTGCCATTTGGGAAGTCAACCCAAGACATAACCATTGTTGCTCAGATGGGAGATAGATACAACATGACAGTGAAGGAATTAGTGAAAACCCTGAGATTAACTATCTTGACACAATAG 705 0.3787 MEESGENWPSDSDLEMGDDNNNDYCYDDEEELGCDEEIQYFAEEALDPIMDETQRKKKQRELEERLLALSATIPSSGFKNNKMDDRSILDNASNYVKQLQQRVRELEQEVGGGSNSNKGSTSYNNEEVNSYNSNNNCDELYYGEGGGNNINLPEVKVRVLQNEVLIIIHCEKQKGLMLKILTKLENLHLLVLNNSVLPFGKSTQDITIVAQMGDRYNMTVKELVKTLRLTILTQ* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0113 234 MobiDBLite consensus disorder prediction 110 127 - -
Ahy9g0113 234 Gene3D - 51 114 IPR036638 GO:0046983
Ahy9g0113 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 112 IPR036638 GO:0046983
Ahy9g0113 234 MobiDBLite consensus disorder prediction 106 127 - -
Ahy9g0113 234 PANTHER PROTEIN, PUTATIVE-RELATED 45 234 - -
Ahy9g0113 234 MobiDBLite consensus disorder prediction 1 27 - -
Ahy9g0113 234 Coils Coil 89 116 - -
Ahy9g0113 234 PANTHER BHLH TRANSCRIPTION FACTOR 45 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0113 Ahy-Chr9 972052 977620 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0113 45 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.894 4.55e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0113 - - aip:107616596 376.326