Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0111 ATGGAAAATTGGCTCTCTCATTTGGAAATAAGTGGTGGTGGGAGTGGCTCAAGCAGTGTATCATTTGAAGAGATTTTAAGCTTCAATGGTGGTCAATCTTGTGATCATAGCTCCAATAATAAGGATAATAATATTATTATTATTGGTGATGAGGCTAATAAACAAGAGAAGAAGAACTCCAAATGGGGTAGTTTAGGGAATAACAATAATAATAAGAGAACAACAAAGAAGGCAAGAAATTCAATAGAGGCATTGGATCACATAATGTCAGAGAGGAAAAGGAGACAACAAATGGCTGAGAAGTTCATAGCACTTGCAGCTGCTATTCCTGGCTTGAAGAAGATAGACAAGGCATCTATACTTCAAGAAGCAATAAATTATGTGAAAGAACTTCAAGAACGCATAGCACTGCTTGAGAAAGAGACCAACAACAAAGAACAATTGATTGTGAAAAATTTACAATTTTATTGTTCTTCTCTGCCGTGTGACAAAAACAATAATAACAACAACATTGGTGGTAATGAAATGGTGCTACCAGAAGTGGAAGCTAGATTGTTAGAAAAGGAACTGCTAATTAGAATCCATTGTGAGAAACGAAATGGAATCATGTTGGAGCTCTTGGCATTTTTGGAAAATAATAATCTCTCTCTGGCTTGTAGCAGCTTCTTGCCATTTGGAAACTCTACTCTCAATGTTATCATCATTGCTTTGATGAACGAGGAATTCAACTTAACATTGAAGGATCTGGTGAAGACGTTGAGGGAGTATCTTTTGAAGTTTATGAGAAGCAATAATAATGGTGGTCCATGCTAG 813 0.3629 MENWLSHLEISGGGSGSSSVSFEEILSFNGGQSCDHSSNNKDNNIIIIGDEANKQEKKNSKWGSLGNNNNNKRTTKKARNSIEALDHIMSERKRRQQMAEKFIALAAAIPGLKKIDKASILQEAINYVKELQERIALLEKETNNKEQLIVKNLQFYCSSLPCDKNNNNNNIGGNEMVLPEVEARLLEKELLIRIHCEKRNGIMLELLAFLENNNLSLACSSFLPFGNSTLNVIIIALMNEEFNLTLKDLVKTLREYLLKFMRSNNNGGPC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0111 270 Gene3D - 71 154 IPR036638 GO:0046983
Ahy9g0111 270 Coils Coil 121 148 - -
Ahy9g0111 270 PANTHER BHLH TRANSCRIPTION FACTOR 23 261 - -
Ahy9g0111 270 SMART finulus 88 137 IPR011598 GO:0046983
Ahy9g0111 270 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 23 261 - -
Ahy9g0111 270 Pfam Helix-loop-helix DNA-binding domain 87 132 IPR011598 GO:0046983
Ahy9g0111 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 147 IPR036638 GO:0046983
Ahy9g0111 270 MobiDBLite consensus disorder prediction 59 75 - -
Ahy9g0111 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 82 131 IPR011598 GO:0046983
Ahy9g0111 270 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0111 Ahy-Chr9 955385 960355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0111 6 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.122 1.46e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g0111 HLH 1.90E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0111 - - ahf:112712745 485.723