Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0110 ATGGATGATTTTTCATGGGAGCATTTGCATCTTCAATTGGAAATGGATGATGAGAATATGAACAATAATAATGGCGTTGATGATGATAATAATGAAGATGATGATGAGTTCTTAAGAGAAATCCTAATGTTGCAACCATCTTTCTCTTCTGAAAATAGTGAAAGTGATAATCTCCAAAACACCGTTGGATCATCATCATCACCGGTTATTGAAGAAGTGCCGCAAGATCTGACGGCTGAGAATTCAAACAACAAGAACAAGAAGAATAATACTATGAAACAACCTCGTAGATCATCATCATCATCATCACTACGTTGTTCTTCTCCGAGGAGATACATTTTGTCGTTTGATAACTCAACCATGACACCAGCTACACCAAATCAATTACAAGAAGACCCTTATTATGCAAACAATAATAATAATAATCATAAGAACAAGAAGAACAAAGATCCATCATCATGTGATTATTCTTCTCCAAAAAGGGTGGTGCCGATTTGTACTAATAATAGTGAGAATAAAAAGGAGGAAGGTGCAATAACAACAAAGAGGGCAAGAAGCTCTTCACAAACAATGGATCACATCATGGCAGAGAGAAAGAGGAGACAAGAACTCACTGAGAGGTTCATAGCACTCTCAGCTACCATCCCTGGCTTGACTAAGACAGACAAGGCATCAATACTTAGAGCAGCCATAGATTATGTGAAGCAACTTCAAGAGCAGGTGCAAGAATTAGAAAAGAAAAACAAGAAGAGGAGCAGAGAGTCAGTGATATTGGTGAAGAAATCGAAGAGCAATAATGAAAAAATATTATTAGAAGAAAGTACAATAATATCAAGTGAAACAAGAAGAAGTAAAGATGGTGGAACAGGGCTCCCTGATATTGAAGCAAGATTTATGGGGAAAGATGTTCTGATTGAGATTCATTGTGAGAAGGAGAATGGCATTGAGATGAAAATACTTAATCAGCTTGAAAATCTTCATCTTTTTGTCACTGGAAGTAGTGTTCTTCCTTTTGGCAATTCTGCTCTGGGGATCACTATTATTGCTAAGATGGGAGATTCGTGTGAAATGACAGTGAATGATGTGGTCAGAAACCTTAGGCAAGTGTTCTTGAAGGCACATCAAAATTCACATGGCATTTAA 1143 0.3701 MDDFSWEHLHLQLEMDDENMNNNNGVDDDNNEDDDEFLREILMLQPSFSSENSESDNLQNTVGSSSSPVIEEVPQDLTAENSNNKNKKNNTMKQPRRSSSSSSLRCSSPRRYILSFDNSTMTPATPNQLQEDPYYANNNNNNHKNKKNKDPSSCDYSSPKRVVPICTNNSENKKEEGAITTKRARSSSQTMDHIMAERKRRQELTERFIALSATIPGLTKTDKASILRAAIDYVKQLQEQVQELEKKNKKRSRESVILVKKSKSNNEKILLEESTIISSETRRSKDGGTGLPDIEARFMGKDVLIEIHCEKENGIEMKILNQLENLHLFVTGSSVLPFGNSALGITIIAKMGDSCEMTVNDVVRNLRQVFLKAHQNSHGI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0110 380 Gene3D - 186 261 IPR036638 GO:0046983
Ahy9g0110 380 SMART finulus 194 243 IPR011598 GO:0046983
Ahy9g0110 380 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 375 - -
Ahy9g0110 380 Pfam Helix-loop-helix DNA-binding domain 192 238 IPR011598 GO:0046983
Ahy9g0110 380 Coils Coil 227 254 - -
Ahy9g0110 380 PANTHER BHLH TRANSCRIPTION FACTOR 5 375 - -
Ahy9g0110 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 188 237 IPR011598 GO:0046983
Ahy9g0110 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 254 IPR036638 GO:0046983
Ahy9g0110 380 MobiDBLite consensus disorder prediction 48 158 - -
Ahy9g0110 380 MobiDBLite consensus disorder prediction 48 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0110 Ahy-Chr9 936798 942082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0110 181 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 49.741 1.39e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g0110 HLH 1.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0110 - - ahf:112779544 584.719