Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0109 ATGGGGGAGCCATGCCACAATTATTGGTACTCTGACATGGGGATCCAAGATGATGATATCTTCAGCCAACGTTACAAGATTAACTCATCACTAATTGTTGATGAAGATCATATCATTAGGGAGATCATGGATCATCATCATCATCACCAACCAGCTTTCTCATCTGAAAGTGATAATAGTCACTCTCCCACAAATAATAATCAAATCAAAGGTGGTGGAAGTGGCAATACTAGTAGCTTTGTGTTCAACAACAATAATCAACATGCACCATTATTGTTGGATATGAAAGCTTCTACTTCAACATCTTCTCCAAGATCATACATTCTATCTTTCCATGATTCCACCGTTATTGCCGCCACGGTGGCCGCCGCGGCTACTCCTCCTCCTCCTCCATCATTAGAAACCTATAATAACAATGGGAAACGACCATACCAACGCATTGAAGTGCCATTAGAAAATCAAGCAAAGAAGGTTAGAAGCTCCTCAGAGACAGTTGATCACATAATGACTGAGAGAAAAAGGAGAAGGGAATTAACTGAGAGATTCATAGCACTTTCAGCCACTATTCCTGGCTTGAAGAAGATTGACAAATCCACTATACTTAGCGAGGCAATAAGTCATGTGAAACAACTCAAACAACGAGTGAAGGAATTAGAAGAACAAAAGAAGAAGATAAGTGTAGAATCAGTGTCATTCATTATTAGGAAATCCCACCTCATGAATGGAACTAATAATAAGGATGATGAAAAAGGTGCAATCAATAATAAAGCAGCAACAAGTGAAGCACTACTCCCAACGGTGGAAGCAAGAGTGCTCAAAAATGATGTGCTAATAAGGATCCATTGCATGAAACAAAGTGGTATTATGCTCAAAATATTGCGACATCTTAAGAGTTTTGATCTCTCTGCCATTAGCAATAGTGTATTGCCATTTGGAAATTCCACTCTTGATATCACCATTATTGCTCAGATAGGTGACAAATTCAACGTGACAATGAATGATTTAGTGAAAAATCTGAGATTGTCTATCTTGGAGTCCCCTAATGATGATGAAGAACCACACAACAGTAATTGA 1074 0.3864 MGEPCHNYWYSDMGIQDDDIFSQRYKINSSLIVDEDHIIREIMDHHHHHQPAFSSESDNSHSPTNNNQIKGGGSGNTSSFVFNNNNQHAPLLLDMKASTSTSSPRSYILSFHDSTVIAATVAAAATPPPPPSLETYNNNGKRPYQRIEVPLENQAKKVRSSSETVDHIMTERKRRRELTERFIALSATIPGLKKIDKSTILSEAISHVKQLKQRVKELEEQKKKISVESVSFIIRKSHLMNGTNNKDDEKGAINNKAATSEALLPTVEARVLKNDVLIRIHCMKQSGIMLKILRHLKSFDLSAISNSVLPFGNSTLDITIIAQIGDKFNVTMNDLVKNLRLSILESPNDDEEPHNSN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0109 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Ahy9g0109 357 Gene3D - 160 231 IPR036638 GO:0046983
Ahy9g0109 357 MobiDBLite consensus disorder prediction 47 83 - -
Ahy9g0109 357 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 29 346 - -
Ahy9g0109 357 SMART finulus 168 217 IPR011598 GO:0046983
Ahy9g0109 357 Coils Coil 201 228 - -
Ahy9g0109 357 PANTHER BHLH TRANSCRIPTION FACTOR 29 346 - -
Ahy9g0109 357 Pfam Helix-loop-helix DNA-binding domain 167 212 IPR011598 GO:0046983
Ahy9g0109 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 234 IPR036638 GO:0046983
Ahy9g0109 357 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0109 Ahy-Chr9 926177 930103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0109 159 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.055 6.34e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g0109 HLH 6.70E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0109 - - adu:107463717 657.136