Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0097 ATGGCTAGACCACAACAACGCTATAGAGGTGTTCGCCAGAGGCATTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACAAGAATATGGCTAGGAACATTTGAAACAGCTGAGGATGCAGCAAGAGCATATGATGAAGCAGCTAGGTTAATGTGTGGACCAAAAGCAAGAACTAATTTCCCATTTAATCCAAATTTGTCACAATCATCATCATCTTCTTCTTCTTCTAAGCTACTATCTCCTACTTTGACTGCAAAATTACACAAATGCCACTTGGCTTCCCTTGCCCTTCAAATGTCCAATAACAAGCAAAAATCATCACAACCCAACAAAGATCCTCAACCACCACCACCATCATCATCATCATCAACATCATCAAATAATAGATTATTCAATAATCAATTCCCAATTGGTGCTGGAACAATTGCATATGAGGAGTTACACTGGCTAGAAGGGAATAATAATAATAATAATATTATTAATAATAATAATTGGGGTGGCATTATTGAAGGACATCAAGTTGAGGTTGCACAACAACAATTTCAGCCAGTTCTTGAAGATGATCACATTGAGCAAATGATACAAGAGTTGCTTGATTGTGGATCAATTGAACTTTGCTCAATTGGGTCAAATTAA 645 0.3767 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPFNPNLSQSSSSSSSSKLLSPTLTAKLHKCHLASLALQMSNNKQKSSQPNKDPQPPPPSSSSSTSSNNRLFNNQFPIGAGTIAYEELHWLEGNNNNNNIINNNNWGGIIEGHQVEVAQQQFQPVLEDDHIEQMIQELLDCGSIELCSIGSN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0097 214 PANTHER ETHYLENE RESPONSE FACTOR 1 210 - -
Ahy9g0097 214 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 210 - -
Ahy9g0097 214 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Ahy9g0097 214 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 MobiDBLite consensus disorder prediction 104 133 - -
Ahy9g0097 214 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Ahy9g0097 214 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0097 Ahy-Chr9 855010 856456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0097 1 211 AP2-EREBP Transcription Factor Family AT5G25190 55.450 7.42e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy9g0097 AP2 1.00E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0097 - - adu:107463739 334.339