Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0087 ATGAACCCAGGTAGAGTAAAATTAAGCTCATGGTTCATGCAGTTTGAGTACTCGACATTAGAGAGAGCAACCAATGTTTTCAATGAATTCCATAAACTTGGCGAAGGGGGATACGGTGAAGTTTACAAGGGAACCTTACAAGACGGAAGAGAAATAGCGATAAAGCGATTCTTTTTGAGTGGAATGCAGGGAAAACAACAAGTTTTCAATGAAATTGATGTATACAGCAAAGCTCAACACAAGAATCTAGTTCGGTTCCTTGGTTGCTGCTTCACCTCCACAGAAAGCTATCTGGTTTTTGAATTCCTTGCAAACAAAAGCCTTAACTGCATCTTGTTTGATCCGGAGAAGAAGAAACAGTTGGATTGGCCAAAGAGGCAGGGTATAATCCTTGGCGTAGCTGATGGATTGGAACATCTGCATAGCAATTCTGAAGGGCCAATAATTCATAGAGACATCAAAGCCGGAAACATTTTATTAGACTTGAAATATAGACCAAAGATCTCTGATTTTGGCTTAGCAAAGTTGAAGTCCTATGACTCTACATCTATTGTAGGCACATTGGGGTATATGGCACCAGAATATCTTGCTGGTTGTCCCATAACAGAGAAAGTAGACGTTTACAGCTTTGGAATATTAGTGCTTGAAATTATCAGTGGAGTGGAGAATGCAAAATTTGAGTCTAGTGAAGAAACATTTGAGACTCTTGTTTCTCATGCATGGAAGCATTTCAAATCAAACACAACGTCAAAAATTATTGATGAAAGCATGGAAAATCAAGATGTTGAAGAAATTGCAAGAGTTATCCATGTGGGACTTCTGTGCACACAAGAGTTGTCGTATCTGAGTCCCAGCATGACAGAGGTGGTAGCAATGCTTAGACAGAAGGATGTTGTAATGCCATTACCTTCCAAACCTCCTTTCATTGTTGATTCTTTGGAATTTCCACAAGAAACAGAATCTAGTTGGGAATCCAAAGGTTCAGATGATTCAGAATCCACAGTACCTTTAAATTTTGGAGAAAGAAGTGTGTAA 1035 0.3913 MNPGRVKLSSWFMQFEYSTLERATNVFNEFHKLGEGGYGEVYKGTLQDGREIAIKRFFLSGMQGKQQVFNEIDVYSKAQHKNLVRFLGCCFTSTESYLVFEFLANKSLNCILFDPEKKKQLDWPKRQGIILGVADGLEHLHSNSEGPIIHRDIKAGNILLDLKYRPKISDFGLAKLKSYDSTSIVGTLGYMAPEYLAGCPITEKVDVYSFGILVLEIISGVENAKFESSEETFETLVSHAWKHFKSNTTSKIIDESMENQDVEEIARVIHVGLLCTQELSYLSPSMTEVVAMLRQKDVVMPLPSKPPFIVDSLEFPQETESSWESKGSDDSESTVPLNFGERSV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0087 344 SUPERFAMILY Protein kinase-like (PK-like) 10 323 IPR011009 -
Ahy9g0087 344 MobiDBLite consensus disorder prediction 319 344 - -
Ahy9g0087 344 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 326 - -
Ahy9g0087 344 Pfam Protein kinase domain 27 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0087 344 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 10 326 - -
Ahy9g0087 344 Gene3D Transferase(Phosphotransferase) domain 1 103 305 - -
Ahy9g0087 344 SMART serkin_6 27 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g0087 344 ProSitePatterns Protein kinases ATP-binding region signature. 33 55 IPR017441 GO:0005524
Ahy9g0087 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Ahy9g0087 344 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Ahy9g0087 344 ProSiteProfiles Protein kinase domain profile. 27 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0087 Ahy-Chr9 757159 759224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0087 10 313 Receptor kinase-like Gene Family AT4G28670 58.413 1.32e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy9g0087 Pkinase 3.60E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0087 - - aip:107614699 677.937