Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0003 ATGGGTCGGTGCCGAGCTGCTTCGCGCCCTGCGGACGATGATCCCAACCTAAGATCCAAGAAAAAAAAGGCTGCTTTGAATGTAGAGAATTTAGACACTTCATCCCCAGCTCAAGGAGTAACTGATGGGAAAGGAGCTTTATACCACTGCAATTATTGCAACAAAGATATTTCAGGGATGATTCGCATTAAGTGTGCTGTATGTCAAGATTTTGATCTCTGCATAGAGTGTTTCTCTGTTGGGGCTGAAGTGACACCTCACAAAAGCAATCATCCATATATGATTATGGATAATCTATCTTTTCCCCTTATAACTCCAGATTGGAATGCAGATGAAGAGATGTTACTCTTAGAGGGCATTGAGATGTATGGATTTGGGAATTGGAATGAAGTTGCTGAGTATGTTGGGACAAAAAGCAAATCTCAATGTATTGACCATTATAATGCTATATATATGAATTCACCGTGCTTTCCTCTCCCTGATTTGTCACATGTTATGGGAAAAAACAAAGAGGAACTTCTTGAGATGGCAAAGGGACATGAAGTCAAGAAAGAATGCCCGGCAACTGCAAAGCTTACTCTGAAAGAAGAACCTCCCTTGTCTGAGGGAATAAACTCTGAAGAATCTAATAGGGCAGAAGTCACTAATCCAACATCTATGTTAACCTCAGTATGTGGCAAAACTTACTCAAGTACAATTAAGAAGGCTTCCAATGTGAGCCAGAATGCAGATGGAGTTAAGGTGGAAGTAGAATATCAATCAGATCGGAGCATTGGAGAGAAGAAACCGAAGTTATCTGGCAAAGTTGAGCCTTCTGTGACCGAGTTGAGTGGATACAGTTTTAAGAGAGAGGAATTCGAAATTGAATATGACAATGATGCAGAGCAAGTATTAGCAGATATGGAATTTAAGGACATCGATACTGAGTCTGAACGTGAAATGAAACTGCATGTGCTCCGTATTTATTCAAGAAGATTAGATGAGCGGAAGCGCAGAAAGAATTTTATACTTGAAAGAAATTTACTTTATCCTGATCCATTTGAGAAAAGTCTCTCTCCTGAGGAGGTTGAAATATGTCAGCGCTATAAGGTCTTCACACGGTTTCACTCGAAAGAAGAGCATATGGAGTTGCTCAAAAATATTATTGAAGAACACAGGCTTATCAAAAGAATACAGGATTTGCAGGAAGCACATACTGCTGGCTATCAAACATCTACAGAGGCTTACAAATTTATCGAACAGAAGAAAAAAGAAGCGGAACGTGTTGTTAAAGAAAATAATCATATTGGTGTTGGTGCTAAGATATTACCAAGACCGTATTATCTCAAAGGAGAACTTGATAGCAACTCACTGGGTCTTCATAAGGATATTACAGCTCCACTTTCTGGGGTGAAGTATCCAGCTGCGGCCATACAGGATATATCAAGATCTCTAGAAGAATGGGATATTAGTGGATTCGCCGGGGCTGAACTGCTGTCTGAATCTGAGATAAATCTTTGTAATGAGATCAGAATACTACCATCACACTATTTCAAAATGCAGAATGTCTTATCATCAGAAATTTCAAAAGGCAACATATCGAAGAAATGTGATGCGCATAGGTTGTTCAAGGTCGAGCCAAGCAAGGTTGATAGAGTTTATGATATCCTTATAAAAAAGGGGATTGCTTCTTCAAATTGA 1680 0.394 MGRCRAASRPADDDPNLRSKKKKAALNVENLDTSSPAQGVTDGKGALYHCNYCNKDISGMIRIKCAVCQDFDLCIECFSVGAEVTPHKSNHPYMIMDNLSFPLITPDWNADEEMLLLEGIEMYGFGNWNEVAEYVGTKSKSQCIDHYNAIYMNSPCFPLPDLSHVMGKNKEELLEMAKGHEVKKECPATAKLTLKEEPPLSEGINSEESNRAEVTNPTSMLTSVCGKTYSSTIKKASNVSQNADGVKVEVEYQSDRSIGEKKPKLSGKVEPSVTELSGYSFKREEFEIEYDNDAEQVLADMEFKDIDTESEREMKLHVLRIYSRRLDERKRRKNFILERNLLYPDPFEKSLSPEEVEICQRYKVFTRFHSKEEHMELLKNIIEEHRLIKRIQDLQEAHTAGYQTSTEAYKFIEQKKKEAERVVKENNHIGVGAKILPRPYYLKGELDSNSLGLHKDITAPLSGVKYPAAAIQDISRSLEEWDISGFAGAELLSESEINLCNEIRILPSHYFKMQNVLSSEISKGNISKKCDAHRLFKVEPSKVDRVYDILIKKGIASSN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0003 559 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Ahy9g0003 559 CDD SANT 108 148 IPR001005 -
Ahy9g0003 559 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Ahy9g0003 559 Gene3D - 472 557 IPR036388 -
Ahy9g0003 559 MobiDBLite consensus disorder prediction 1 20 - -
Ahy9g0003 559 Gene3D - 42 96 IPR043145 -
Ahy9g0003 559 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 156 IPR017930 -
Ahy9g0003 559 Gene3D - 101 153 - -
Ahy9g0003 559 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Ahy9g0003 559 PIRSF Txn_adaptor_ADA2 35 559 IPR016827 GO:0003713|GO:0006357|GO:0035065
Ahy9g0003 559 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Ahy9g0003 559 SMART zz_5 44 89 IPR000433 GO:0008270
Ahy9g0003 559 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Ahy9g0003 559 ProSiteProfiles SWIRM domain profile. 472 559 IPR007526 GO:0005515
Ahy9g0003 559 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 557 - -
Ahy9g0003 559 CDD ZZ_ADA2 48 96 IPR041983 -
Ahy9g0003 559 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Ahy9g0003 559 SUPERFAMILY RING/U-box 48 111 - -
Ahy9g0003 559 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Ahy9g0003 559 SUPERFAMILY Homeodomain-like 476 555 IPR009057 -
Ahy9g0003 559 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 557 IPR034318 GO:0003713|GO:0006357|GO:0035065
Ahy9g0003 559 SMART sant 104 153 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0003 Ahy-Chr9 26360 38181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0003 1 559 EF-hand Containing Proteins AT3G07740 54.101 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy9g0003 Myb_DNA-binding 2.30E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0003 K11314 - gmx:100779424 815.068