Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2801 ATGAAGAAGAGACAGGTGGCGGTGAAGACTTCGTCGACGGTGATAAGGAACGTAAGGTACGGGGAGTGCCAGAAGAATCACGCGGCCAATATCGGAGGGTACGCGGTGGATGGGTGCAGGGAGTTCATGGCCAGTGCAGGGGAAGGAACCAACGGCGCTCTCACGTGTGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCAGGGAAGTGCAAACTGAGGTTGTCTGTGAGTACTCTCCTCCTCATCATCAAAACTGA 258 0.562 MKKRQVAVKTSSTVIRNVRYGECQKNHAANIGGYAVDGCREFMASAGEGTNGALTCAACGCHRNFHRREVQTEVVCEYSPPHHQN* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2801 85 PANTHER MINI ZINC FINGER PROTEIN 3 2 81 - -
Ahy8g2801 85 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 19 70 IPR006456 -
Ahy8g2801 85 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 2 81 - -
Ahy8g2801 85 Pfam ZF-HD protein dimerisation region 17 70 IPR006456 -
Ahy8g2801 85 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 20 69 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2801 Ahy-Chr8 51481338 51482840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2801 1 85 Zinc finger-homeobox gene family AT1G18835 72.527 3.21e-40 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy8g2801 ZF-HD_dimer 6.80E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2801 - - gmx:100785967 156.377