Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2798 ATGATGATGGAGTCTCGTTACTTTCATGACATTTTATATGATGCTAGTGCTACTACTCCTCCTCCTCTTCCCACTCATCCAATATTAAGTAGCATGCAAGGTTGGTTGGTTTTAACTAAGTTTGAATTTGATATGGATGTTGTAGAGCGTTGTGATGAAGAAAGTGATAATGCAGAGAATGAATACGTGGATAATGCATGGAAGGAAATGAGCAAGGATAAGGGTAAGGATAAGAAGGGCTTAACAAGGAAGAGCATTTCTGAGTGCTTCTACATGCCCATAGCAGAAGCGGCGAGACACCTCAAGGTGGGTCTCATACATCTCAAGAGAAGGTGGAGGGACTTAGGCATTCAGAGGTGGCCTCACAGGAAGCTCATGAGTCTTCAAACCCTAATCAACAATCTGCAGCAGCAGCAGGAGGAGGGAGTTGATGAGGATGAGAGCAGCAGAATACTTGCAACTGGAGACCACACCAAAAGGCTAAGACAAGCATGCTTTAAAGCCAACTACAACAAGAGGAGGAAGCAGCCAGTGCAACCAAACATCATGATCCTCATTCTCACTTTAACAAACCCCTTTAATTAG 585 0.4376 MMMESRYFHDILYDASATTPPPLPTHPILSSMQGWLVLTKFEFDMDVVERCDEESDNAENEYVDNAWKEMSKDKGKDKKGLTRKSISECFYMPIAEAARHLKVGLIHLKRRWRDLGIQRWPHRKLMSLQTLINNLQQQQEEGVDEDESSRILATGDHTKRLRQACFKANYNKRRKQPVQPNIMILILTLTNPFN* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2798 194 PANTHER PROTEIN RKD1-RELATED 54 175 - -
Ahy8g2798 194 PANTHER PROTEIN RKD4 54 175 IPR044607 GO:0003700
Ahy8g2798 194 ProSiteProfiles RWP-RK domain profile. 63 148 IPR003035 -
Ahy8g2798 194 Pfam RWP-RK domain 81 128 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2798 Ahy-Chr8 51443642 51445229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2798 79 182 AtRKD Transcription Factor Family AT1G18790 47.541 1.71e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy8g2798 RWP-RK 4.60E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2798 - - adu:110274768 362.844