Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2755 ATGATGAGTATGAGTAGTAGTAGTCATCAGTATTTGATTCCAAACTGGAACATGAAACAACAACAACAACAAAAACAAGAACAAGAACAGGAAACACTCCAATTAGAAGAGGGTATTACTATTACCAAATCTTCTCAAGCTTCTCCCACCACTCATCTTGTTCCCATGGCCAATAATTATGATGAGATTGCAGAGCTGACATGGGAAAATGGGCAGATATCAATGCATGGGCTCAGTGGGCTTGATCCAACTTCACAAAAAAAGCCCACATGGGTTAATAGGGCCCATGATACATTAGAGTCCATTGTTCAACAAGCCACATGCAAGAATAAAAAGTCAAAGTTGACCATAAAAGACAACCATGCTTATGTTGATGTTCCTACCACAACAAGCTCCATTGTTGCATCTTCAGGGGAACATCATCAAATGGTGCCAACACTTTCAAGGAAAAGATCACATTCTTCTTATTCCGATCAACAACAACATCGGAGAGATGTTAATTATGTTAGCATCAATAATACTAATAGGAAATGTGGTGTTGCTACTGCTAGTGTCACATTTTGTAGGGACAACAATGACGTCACAACCATGATGACGTGGCCTTCTCTTGGCTCTGGTCCAAGAAGCTTCAAAAATGATAAGATTCTTGAGGAGGATTCTGCTTGTCAAAGTGGATCGGAAGTTCGGAATAATGAAAATGATAGAGATGGTGGAAAAGGTGAAACAGGGCAGAGCAAATCATCATCAGTTGTAAGGAGAAATAGAACTGCTGCCGTCCATAACCAATCAGAACGGAGAAGAAGAGATAGAATTAATCAGAAGATGAAAGCATTGCAGCGGTTAGTGCCTAATGCAAATAAGACAGACAAAGCTTCAATGTTGGATGAGGTGATTAAGTACTTGAAACAACTTCAAGCACAGATAGAAATGATGATGAGTGTGAGCATGCCACAAATGATAATGCAACAACAACTTCAAATGTCTATGCTAGCAAGATCAATGGCAAACAATGCTCCAAATCCAATTAGGCCATTGTTTCCACAACTCATCCAACCAACAACAACAATTGGAGCTGCTAACACTGCCTCTGCTCCAATGTTTCTTGCACCTTCCTTGATGATTCCTTCAAGCACCAATGCTTCAATTCCTCTGCCTTCTGCTTCATATGGGGCTGCTACTTTTGCACAACCACTTAATATGGATATGTTGAACAACATGGCAGCATTTTACAGCCAACAGATGAATCATCATCAGAACAATCAAATCAAACCATGA 1275 0.3992 MMSMSSSSHQYLIPNWNMKQQQQQKQEQEQETLQLEEGITITKSSQASPTTHLVPMANNYDEIAELTWENGQISMHGLSGLDPTSQKKPTWVNRAHDTLESIVQQATCKNKKSKLTIKDNHAYVDVPTTTSSIVASSGEHHQMVPTLSRKRSHSSYSDQQQHRRDVNYVSINNTNRKCGVATASVTFCRDNNDVTTMMTWPSLGSGPRSFKNDKILEEDSACQSGSEVRNNENDRDGGKGETGQSKSSSVVRRNRTAAVHNQSERRRRDRINQKMKALQRLVPNANKTDKASMLDEVIKYLKQLQAQIEMMMSVSMPQMIMQQQLQMSMLARSMANNAPNPIRPLFPQLIQPTTTIGAANTASAPMFLAPSLMIPSSTNASIPLPSASYGAATFAQPLNMDMLNNMAAFYSQQMNHHQNNQIKP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2755 424 PANTHER TRANSCRIPTION FACTOR PIF7 17 420 - -
Ahy8g2755 424 Gene3D - 251 313 IPR036638 GO:0046983
Ahy8g2755 424 MobiDBLite consensus disorder prediction 136 165 - -
Ahy8g2755 424 CDD bHLH_AtPIF_like 255 312 - -
Ahy8g2755 424 SMART finulus 261 310 IPR011598 GO:0046983
Ahy8g2755 424 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 17 420 IPR031066 -
Ahy8g2755 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 253 317 IPR036638 GO:0046983
Ahy8g2755 424 MobiDBLite consensus disorder prediction 219 269 - -
Ahy8g2755 424 Coils Coil 261 281 - -
Ahy8g2755 424 Coils Coil 18 38 - -
Ahy8g2755 424 MobiDBLite consensus disorder prediction 242 257 - -
Ahy8g2755 424 Pfam Helix-loop-helix DNA-binding domain 259 305 IPR011598 GO:0046983
Ahy8g2755 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 255 304 IPR011598 GO:0046983
Ahy8g2755 424 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2755 Ahy-Chr8 51012524 51023091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2755 62 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 39.474 1.19e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g2755 HLH 1.60E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2755 - - aip:107624044 755.747