Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy8g2745 | ATGATGAATCCAACAATGGAAGAAGAAGATTATAATCAAGGACAACACATCAACAAGAAGAACAAGCATGTGTGCAAGTTCTGCAGCAGGAGCTTCCCTTGTGGTAGATCCTTGGGTGGTCACATGAGGTCTCATGTCATCAATGGTGACATAGATCATCACCATGACAATAACAAGCTTCTTGCATCATCATCAACAGCAAAAATTAAGAAGATGCTTTCATCTTCTTCATCTACAGAAAACAACACAGGAATAGGTTCTGAAGGCTATGGTCTGAGAGAGAATCCCAAGAAGACATGGAGGCTAACCAATTCAACAAGTGAAGACAATTCTCTGTTGTTCTGCAAGGATTGTGGTAAAGGTTTTCAGTCTTGGAGAGCACTATTTGGCCACATGAAGTGCCATTCTTCTGAGAAAGTAGAGAGCATGGAGTGTGATCAAGATTCATCATGGACTAACAATAGTGCTAGCCATTCTGATAATGAAGAAGCCAATGCTCCAAGCAGAAGGAGAAGATCCAAGAGAACAAGAACAAGGTACATAGCACCATTATCAGCACCAGCAGCAACAACAACTGATTCTTCTGTTTCTGAGGCTGATGAGCATGAACAAGAAGAAGTTGCTATGAGCTTGATGATGTTAAGCAGGGATTTGAGTCCATGGTGTGGTGTCAATTCTGTTTCTGAGTTCTCTAAGAACAAGAACAAGAAGCTTGTCAACATTGGTTCTGAGTTTTCAAAATTAGGCAGCTATTTGAGTTCTCCAAATCTAAGCTCCAAAGGGAAGAAAAGTTCAGAATTTTTGGCTACTGAGAGTGCCAAAGGAGTTAAGGTGATGAACAACACCACAGTTTCAGTTAATGGTTTCAGCAAGATTATTGGGAAGGATAAGAAAAAGTATGAACTTGATTCTGAGTCTGCATTTGAAGAAGGTACTACTAACAATAAGTACAATTCAATTAAGGCAAAGTTTTGGGATTGTGGATCAAACAAAAAGCCTAATTCATCAGAAGGTGAATTCAGCATCAAGAGCAGTTCTTCTCATAATCATAAGAGAGGAAAGTTTGAGTGTACAACCTGCAACAAGATCTTCCATTCATACCAAGCTCTTGGGGGTCACAGAGCAAGTCACAAGAAGATCAAAGGTTGCTCTTTTGCTTCAAGGAATAATAATGATCAGAGCAGTGAAAACAGCATTGAGTTTGAAGCTGAAGCTGAAGCAGAACATGAAGAAGCACCACCACCAGCACCATCATCACCCACCCCCACTGACAACAACAATGAATATGCATCACAACAAGTACATGAATTTGGTAATAATAGTAATGGTTTTGACAGAGAATCCAAGAAGGGAAACAAGAACAAGGGGCATGAATGTCCAATTTGCTTTAAGGTATTTTCATCTGGTCAAGCCTTGGGTGGACACAAGAGGTCCCATATGGCTTCTGCTTCTGATACTGGGAACTTTCATCAAACAGTTGTACTTCAAGAATCTTCAGTGCCTGAGATTAGGGACTTGCTTGATCTCAATCTTCCTGTTGCTGAAGCTGCTGCTACTGAGGAAGATGATGAAGAAGAAATCAATGCTCATGCTTCTGATTCTTACACTACTTGGTGGGAAAATCACAAGCAGGAGGCATTGGTAGGTCTCATGTCTAACTAG | 1662 | 0.4055 | MMNPTMEEEDYNQGQHINKKNKHVCKFCSRSFPCGRSLGGHMRSHVINGDIDHHHDNNKLLASSSTAKIKKMLSSSSSTENNTGIGSEGYGLRENPKKTWRLTNSTSEDNSLLFCKDCGKGFQSWRALFGHMKCHSSEKVESMECDQDSSWTNNSASHSDNEEANAPSRRRRSKRTRTRYIAPLSAPAATTTDSSVSEADEHEQEEVAMSLMMLSRDLSPWCGVNSVSEFSKNKNKKLVNIGSEFSKLGSYLSSPNLSSKGKKSSEFLATESAKGVKVMNNTTVSVNGFSKIIGKDKKKYELDSESAFEEGTTNNKYNSIKAKFWDCGSNKKPNSSEGEFSIKSSSSHNHKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCSFASRNNNDQSSENSIEFEAEAEAEHEEAPPPAPSSPTPTDNNNEYASQQVHEFGNNSNGFDRESKKGNKNKGHECPICFKVFSSGQALGGHKRSHMASASDTGNFHQTVVLQESSVPEIRDLLDLNLPVAEAAATEEDDEEEINAHASDSYTTWWENHKQEALVGLMSN* | 554 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 328 | 353 | - | - | |
| Ahy8g2745 | 553 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 357 | 377 | IPR013087 | - | |
| Ahy8g2745 | 553 | SUPERFAMILY | beta-beta-alpha zinc fingers | 112 | 140 | IPR036236 | - | |
| Ahy8g2745 | 553 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 459 | 479 | IPR013087 | - | |
| Ahy8g2745 | 553 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 457 | 484 | IPR013087 | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 387 | 428 | - | - | |
| Ahy8g2745 | 553 | Pfam | C2H2-type zinc finger | 115 | 137 | - | - | |
| Ahy8g2745 | 553 | Pfam | C2H2-type zinc finger | 23 | 45 | - | - | |
| Ahy8g2745 | 553 | Pfam | C2H2-type zinc finger | 355 | 379 | - | - | |
| Ahy8g2745 | 553 | Pfam | C2H2-type zinc finger | 457 | 481 | - | - | |
| Ahy8g2745 | 553 | SUPERFAMILY | beta-beta-alpha zinc fingers | 20 | 46 | IPR036236 | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 73 | 88 | - | - | |
| Ahy8g2745 | 553 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 23 | 45 | IPR013087 | - | |
| Ahy8g2745 | 553 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 355 | 382 | IPR013087 | - | |
| Ahy8g2745 | 553 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 135 | IPR013087 | - | |
| Ahy8g2745 | 553 | SUPERFAMILY | beta-beta-alpha zinc fingers | 355 | 479 | IPR036236 | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 73 | 95 | - | - | |
| Ahy8g2745 | 553 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 25 | 45 | IPR013087 | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 145 | 202 | - | - | |
| Ahy8g2745 | 553 | PANTHER | C2H2-TYPE ZINC FINGER PROTEIN | 20 | 553 | - | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 146 | 162 | - | - | |
| Ahy8g2745 | 553 | SMART | c2h2final6 | 457 | 479 | IPR013087 | - | |
| Ahy8g2745 | 553 | SMART | c2h2final6 | 355 | 377 | IPR013087 | - | |
| Ahy8g2745 | 553 | SMART | c2h2final6 | 23 | 45 | IPR013087 | - | |
| Ahy8g2745 | 553 | SMART | c2h2final6 | 113 | 135 | IPR013087 | - | |
| Ahy8g2745 | 553 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 113 | 140 | IPR013087 | - | |
| Ahy8g2745 | 553 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 20 | 553 | - | - | |
| Ahy8g2745 | 553 | MobiDBLite | consensus disorder prediction | 329 | 343 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy8g2745 | Ahy-Chr8 | 50942418 | 50944785 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy8g2745 | 352 | 523 | C2H2 Transcription Factor Family | AT3G60580 | 37.143 | 2.43e-20 | 89.7 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C2H2 | Ahy8g2745 | zf-C2H2_6 | 4.90E-11 | CL0361 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy8g2745 | - | - | ahf:112708192 | 1068.91 |