Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2742 ATGAAGGAAATTGATCTTCCATTTGGAGTCCCTAATTCATCCCATGGATTCTACCATGATCTCCATCACCATGTTGATCAATTTCATCAAGTGAATGTGAATGGCAATTCCTCATCATCAAATCATCAAGTTTCTCTAACAAATCTTGATTCCTTTGATGTCTATGAGTGCAAGCCTTTTGTGGAGAATAATAATGTTCATGTTATGGAGGATTTCCAATATAATGGAGGAGGTTTTGGTAATTTGAACCTCACTAATAACAATAATCAAAGTACTCCATTGGATATCATAGTTGGAAACCAAGGTTATTTACCATTTTATCCTCTTCAAGAGACCAAGCCTACAAATCTCGTTGTGCCGGATGAAGTCTCATCCATATCAACAATGGGTTATTACAAAAGGGTCAATGGTGTCAACAAAAACAATAAGTTATACCCAACATCCAAGAAGACCTACAAACTTCAAAAGAAGTCTAACATAGTAAAGGGCCAATGGACAGAAAGCGAAGATAGCTTACTGATTCAGCTGGTAGAACAATATGGATTAAGGAAATGGTCTCATATTGCTCAAATGCTGCCCGGGAGAATTGGAAAACAATGTAGAGAGCGATGGCATAATCATCTAAGACCTAACATTAAGAAAGATATATGGACGGAAGATGAGGATAAGATCCTAATTGAAGCTCATGTGGAGATAGGAAACAAGTGGGCGGAAATTGCGAAAAGATTGCCCGGACGAACTGAAAACTCGATCAAGAACCATTGGAATGCTACCAAGAGAAGGCAATATTCAAAAAGGAAGTGTAGATCCAAGTACCCTAAAGCATCTCTCCTTCAAGAATACATCAAGAGTTTAAATTTGGACAAGAATCCTCTAATGGACTATAGGAGAAAATCTGTTAACCCTAGAGGCAATGCTAACAAAACTAGCTCGGCCGCCTCAAGCAAAGCACCACCACCACTTTCGGCGGCGCAACCTCAGCCGATAGGTAACAATAGTCAATTCTCTATGTCGGATCGATTGGTGCCGAGTTATGATTTCAATGAGGTATTGCCGGATTTTTGTTTTGATGAGAATTTGTTTGAAGGAGGGTGTAGCATTGATTCATTGCTTGATGACATTCCTTGTGCTCCTATTATGGATACTAATACTATTAATGTTGTGGATGTTGATTACAATAATGGTTTTGAGTGTGATGATATGCAACAAGAGATTGGGGAATCCATGATGGAGGGTGATGGAATAATCAAGAAGGAGATGGATTTGGTGGAGATGGTGACAAAGGTCAATAAAAATTGA 1299 0.3872 MKEIDLPFGVPNSSHGFYHDLHHHVDQFHQVNVNGNSSSSNHQVSLTNLDSFDVYECKPFVENNNVHVMEDFQYNGGGFGNLNLTNNNNQSTPLDIIVGNQGYLPFYPLQETKPTNLVVPDEVSSISTMGYYKRVNGVNKNNKLYPTSKKTYKLQKKSNIVKGQWTESEDSLLIQLVEQYGLRKWSHIAQMLPGRIGKQCRERWHNHLRPNIKKDIWTEDEDKILIEAHVEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPKASLLQEYIKSLNLDKNPLMDYRRKSVNPRGNANKTSSAASSKAPPPLSAAQPQPIGNNSQFSMSDRLVPSYDFNEVLPDFCFDENLFEGGCSIDSLLDDIPCAPIMDTNTINVVDVDYNNGFECDDMQQEIGESMMEGDGIIKKEMDLVEMVTKVNKN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2742 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 212 IPR017930 -
Ahy8g2742 432 SUPERFAMILY Homeodomain-like 159 255 IPR009057 -
Ahy8g2742 432 ProSiteProfiles Myb-like domain profile. 157 208 IPR001005 -
Ahy8g2742 432 ProSiteProfiles Myb-like domain profile. 209 259 IPR001005 -
Ahy8g2742 432 MobiDBLite consensus disorder prediction 302 335 - -
Ahy8g2742 432 SMART sant 161 210 IPR001005 -
Ahy8g2742 432 SMART sant 213 261 IPR001005 -
Ahy8g2742 432 CDD SANT 217 259 IPR001005 -
Ahy8g2742 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 263 IPR017930 -
Ahy8g2742 432 PANTHER MYB PROTEIN-RELATED 104 370 - -
Ahy8g2742 432 MobiDBLite consensus disorder prediction 293 335 - -
Ahy8g2742 432 Pfam Myb-like DNA-binding domain 217 256 IPR001005 -
Ahy8g2742 432 Pfam Myb-like DNA-binding domain 162 208 IPR001005 -
Ahy8g2742 432 Gene3D - 215 280 - -
Ahy8g2742 432 CDD SANT 165 208 IPR001005 -
Ahy8g2742 432 Gene3D - 161 214 - -
Ahy8g2742 432 PANTHER BNAC07G50190D PROTEIN 104 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2742 Ahy-Chr8 50918170 50919757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2742 53 375 MYB Transcription Factor Family AT4G18770 51.479 2.46e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g2742 Myb_DNA-binding 1.10E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2742 K09422 - gmx:102662267 452.21