Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2720 ATGGCTTCTTCTACTTCTTTTGCTTCTCTCTTACTCCCTCTTTACAACCCCGCTTTCCGACCAAAACCAACAACTTCTCTTCCCGCTTTTCGCTCCATTCACTCTTCTGTGCTCCCAGCTACTGATGGATCTCAAGCACCCCACAAGAGAACAAGAAGAATGGAAGGTCCTCGGAAAAGCATGGAAGATTCAGTTCAGCGCAAAATGGAGCAGTTTTATGAAGGGAAAGATGGGCCACCTCTCCGTGTTCTTCCGATTGGTGGGCTGGGTGAAATTGGGATGAACTGCATGCTGGTTGGGAACCATGATCGCTATATCCTCATTGATGCCGGAGTTATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATCATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAGGATCACATTGGAGCGTTGCCTTGGGTCATTCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTCTGAAGGAGCATGGTATTTTTCTTCCATCTAGACTCAAGATATTTAGAACAAGAAAGAAGTTTATGGCTGGGCCATTCGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTGGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATCGACGAGACACCTCTGGACGGGAAAGTTTTTGATCGCGAGGCTTTAGAGGAACTCTCTTCAGAAGGAGTAACACTGATGATGAGTGATTCAACCAATGTACTCTCACCTGGAAGGACAATAAGTGAATCTGTTGTTAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACCACCCAATTTGCATCAAATCTGCATCGACTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCCGAAAGTTGGTATTCGTTGGCATGTCTTTGAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCCTCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGAAGTAGTCATGCTTTCAAACTAACTAAGGAAGATATTGTTTTGTATTCGGCCAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGCTGAACCGCATATCAGAGATTGGATCAACAATAATAATGGGTAAAAATGAAGGTCTCCACACATCTGGTCATGCTTATCGTGGGGAATTGGAGGAAGTACTTCGAATTGTGAAGCCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAAATGGCATTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGGAGAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAGAGAGAATTTACAGTTGAAGTACAGTGATGGCGACAAAGCATTTGGTACATCAAGCGACCTCTTCATTGATGAAAGATTGAAAATTGCATTAGATGGCATCATCGTGGTTAGCATGGAAGTTTTTCGCCCCCAAAGAGCAGAGAGTTTGGCTGAAAACACCTTAAATGGGAAGATAAGGATTATGACAAGATGCCTATGGCTTGACAAGGGAAAGTTATTGGATGCACTGCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAAGTGTCCACTGGCTCACATGGAAAGAACTGTGGCCGAGGTCTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGTTATTGCCATAGAAAATCCAGCTGCTGTTCTTGCAGAGGAGATAAACACAAAGTTATCTGGCAAATCACATGTGGATCATGGAACATCAACATTAAGAAAAATAGTCGATGGGCACGGGAAGGAAAATCAGCCAGACACAACGCAAATAAGAGGACTTCTACCTGAGGAAGACACTGGTCCACCAACCGAAGAAGCCGAGGGTGATTTATCGGATTCAGAGGAATTTTGGAAGCCATTTATTGCATCCTCACCAGTTGAGAAGTCAATCAAAGCTAACAACGGTTATGTTCCACGAAAGGAGCACAAGTCTAATATTAAGAAAGATGATTCCGAAGACATTGGTGAAGCCAACTTTGTGAAAGCATCCAGTTCTGAACTCAAGTCGTCGAAGTCAGGGAAGAGGAATAAATGGAAACCTGAAGAAATTAAGAAGTTGATTAACATGCGCGGGAAACTACACGGTAGATTTCAAATTGTGAAGGGAAGGATGGCTTTATGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACATCTTTGGTACAGAAATATCAGGAGACCAAGAACGAGAAGGGTAGTAGCAAGAGCAGTTGGCAATATCTTGAGGACATGGAAAAGATAATGCCTGATAGTGAAGCAATGGCAACAAAATGA 2595 0.4262 MASSTSFASLLLPLYNPAFRPKPTTSLPAFRSIHSSVLPATDGSQAPHKRTRRMEGPRKSMEDSVQRKMEQFYEGKDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLPSRLKIFRTRKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSSEGVTLMMSDSTNVLSPGRTISESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIVLYSAKVIPGNESRVMKMLNRISEIGSTIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGRENLQLKYSDGDKAFGTSSDLFIDERLKIALDGIIVVSMEVFRPQRAESLAENTLNGKIRIMTRCLWLDKGKLLDALHKAAHAALSSCPVKCPLAHMERTVAEVLRKMVRKYSGKRPEVIVIAIENPAAVLAEEINTKLSGKSHVDHGTSTLRKIVDGHGKENQPDTTQIRGLLPEEDTGPPTEEAEGDLSDSEEFWKPFIASSPVEKSIKANNGYVPRKEHKSNIKKDDSEDIGEANFVKASSSELKSSKSGKRNKWKPEEIKKLINMRGKLHGRFQIVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLVQKYQETKNEKGSSKSSWQYLEDMEKIMPDSEAMATK* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2720 864 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 438 474 IPR011108 -
Ahy8g2720 864 SMART Lactamase_B_5a 93 293 IPR001279 -
Ahy8g2720 864 MobiDBLite consensus disorder prediction 46 64 - -
Ahy8g2720 864 Gene3D - 772 833 - -
Ahy8g2720 864 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 495 IPR036866 -
Ahy8g2720 864 Gene3D - 282 432 IPR042173 -
Ahy8g2720 864 MobiDBLite consensus disorder prediction 38 64 - -
Ahy8g2720 864 PANTHER RIBONUCLEASE J 11 864 - -
Ahy8g2720 864 MobiDBLite consensus disorder prediction 726 745 - -
Ahy8g2720 864 CDD GT1 770 835 - -
Ahy8g2720 864 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 11 864 - -
Ahy8g2720 864 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Ahy8g2720 864 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Ahy8g2720 864 MobiDBLite consensus disorder prediction 728 745 - -
Ahy8g2720 864 Gene3D - 85 497 IPR036866 -
Ahy8g2720 864 CDD RNaseJ_MBL-fold 84 495 - -
Ahy8g2720 864 Pfam Myb/SANT-like DNA-binding domain 769 854 IPR044822 -
Ahy8g2720 864 MobiDBLite consensus disorder prediction 668 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2720 Ahy-Chr8 50681453 50689142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2720 772 855 Trihelix Transcription Factor Family AT1G13450 29.412 1.11e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy8g2720 Lactamase_B_2 9.50E-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2720 - - gmx:100783850 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2971 18 134799342 134806952 Ahy8g2720 8 50681453 50689142 hybridization
Ahy11g1559 11 72984593 72993252 Ahy8g2720 8 50681453 50689142 PCT
Ahy8g2720 8 50681453 50689142 Ahy11g1559 11 72984593 72993252 PCT