Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2717 ATGGTTTCAACAAGACGCAACAGTGGATCTCTCTCCGCAAAACGACCTTCTTCTTCTTCCGACGACAAACCTCCTTCTCCTTCTTCTAAACGCCAAAAGGGTGACAGTGGTGGTAGTGGTGGTGCGTCGGAGAAACCGGTGACGGCGGCGGAGGATTCCAAGGAATTGCGTGCTCCAGAGGCCGCCGCCGATCCCGGAGAATGCGGCACTGCTAATGACGCTCAGATCGCCGGCAACGATGGCAAAGCTGATGCCCCACCAGCCGTACCAGTGCCAGCGCCGATCGCCGATGGGTCTACGCCAAGTTTGGTGGCTGATAAACCAAAGAGTTCGTTCTCTTCGTGGTTTTATCAGAAGCAAAATCCCAACTCTGAGGGTGTTCCCTGGTGCAGGCTCTTATCCCAGTCTTCACAGAATCCGAATGTTCCTATTTCCACATCGAACTTCACAATTGGTTCTAGTAGAAATTCCAACTTCCCGCTGAAGGATCATACTGCAAGTGGAACTTTGTGCAAGATCAAGCAATCCCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGGTGACCCTTCAGCCGTAGCTGGGGCTTCTATTTTGGCTTCTTTGTCTAGCTTTAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAGCCTCACCAGGGTACTGACGTTTCAGAGAGTGAGCTTGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGAACCAGATGATGCAGTCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCCGGGTCCTTGCCGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAACGGGGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCCAAGGAAGCCGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGACGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGTACAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 3690 0.4434 MVSTRRNSGSLSAKRPSSSSDDKPPSPSSKRQKGDSGGSGGASEKPVTAAEDSKELRAPEAAADPGECGTANDAQIAGNDGKADAPPAVPVPAPIADGSTPSLVADKPKSSFSSWFYQKQNPNSEGVPWCRLLSQSSQNPNVPISTSNFTIGSSRNSNFPLKDHTASGTLCKIKQSQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTGDPSAVAGASILASLSSFRQDLTRWKSPSQSASKPHQGTDVSESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCEPDDAVTEAGNVKISGVNDFLRPFFRVLAGSSCKLKLSKSICKQVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRYRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2717 1229 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 78 1229 - -
Ahy8g2717 1229 SUPERFAMILY SMAD/FHA domain 128 227 IPR008984 GO:0005515
Ahy8g2717 1229 Gene3D - 923 1204 IPR027417 -
Ahy8g2717 1229 ProSitePatterns AAA-protein family signature. 1068 1087 IPR003960 GO:0005524|GO:0016887
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 302 326 - -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 524 576 - -
Ahy8g2717 1229 Gene3D - 128 237 - -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 1 102 - -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 280 295 - -
Ahy8g2717 1229 Pfam ATPase family associated with various cellular activities (AAA) 965 1094 IPR003959 GO:0005524|GO:0016887
Ahy8g2717 1229 CDD AAA 963 1096 - -
Ahy8g2717 1229 Gene3D - 1097 1191 - -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 1 36 - -
Ahy8g2717 1229 Pfam FHA domain 150 219 IPR000253 GO:0005515
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 562 576 - -
Ahy8g2717 1229 SMART AAA_5 961 1098 IPR003593 -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 524 555 - -
Ahy8g2717 1229 MobiDBLite consensus disorder prediction 280 336 - -
Ahy8g2717 1229 CDD FHA 129 229 IPR000253 GO:0005515
Ahy8g2717 1229 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 78 1229 - -
Ahy8g2717 1229 Coils Coil 885 905 - -
Ahy8g2717 1229 Pfam AAA+ lid domain 1118 1156 IPR041569 -
Ahy8g2717 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 1205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2717 Ahy-Chr8 50659044 50671933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2717 924 1173 Calmodulin-binding Proteins AT3G56690 40.467 2.83e-42 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2969 18 134779594 134789233 Ahy8g2717 8 50659044 50671933 hybridization