LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy8g2702	ATGGTTGTTTCAATGCAGAAGAAGAACAAGATGAAGGAGTTCATAGGACACAGATGGGTAGTGTTTGTGTGTGCAATATGGGACATGTCATTTGCAGGAACATCATACATGTTTGGGAGCATTTCTCCAGTGATCAAGAGCAGCATGGGATACAATCAGCAACAAGTGGCGTTTTTGAGTGTTGCAAAGGATCTTGGTGACAACGTTGGACTCCTTGCTGGTAAGATCAGTGAGGTTTCACCAACTTGGAGGGTCATTCTTGTTGGGGTTATTCAGAATGTTTTTGGTTATGGCCTTGTTTGGCTTGTTGTCACTCATAGACTTCCTTCTTTGCCTTTGTGGATGCTATGCTTTTTCATCTTCTTGGGACAAAATGGATCTACATATTACAACACGGCCGCGCTAGTTTCTTGTGTGCAAAGTTTCCCGGAGAGTCGAGGACCGGTGGTGGGGATACTGAAGGGTTTTGTTGGCTTAAGCGGCGCAATATGGACTCAAATTGTTGCAATGATCAGCTTCCCTGATCAAGCATCTCTGATTTTTGTCATAGCAGTTGGGCCTGCTATGGTTTCTTGCGCTCTCATGTTCATCATAAGGCCTGTCGAAAGCTACAACAAGCAATCTTCTAGATCCTCTGAGGATGGTTCTGGCTTCATGTTCATCTATAGCGTTTGCCTTCTCTTAGCAGCATACCTTATGGGGGTTTTAATGCTAGAAAACATGTTCAATTTGGACCACAACACCATTACATTAATTGCGATTGTTTTGATCATTCTCATTTTGCTTCCAATTATAGTTCCTATCTTTATGGTTTTCTTTACTCAACCTCAAAATCTAGATCAAGAAAGCCTTCTTCAACCAGAAACAAGAACAAGTACATCAACGCGTGTGGTAGATGGTGAGACTAGTGCAAGTTCTTGCCTTGTCAAAGAAGATAAAGCTCAAAAGCAAACAGGGCTGCCAGTAACCGAAAGGCCAGGAAAAATTGTTAAGTTTCAAGCTAAGCTTTCGCGAGTAATCTCTGAAGCTGTGAAGAAACTGAAGCAGAAGAATGGGCCGCATCGAGGAGACGATTTCACCCTATCACAAGCATTGATGAAGGCTGATTTCTTGATCATGTTCTTCTCTATTGTCTTGGGGTGTGGATCAGGTTTGACAATGATCAACAACATGGGTCAGATTTGCCAGTCCTTGGGAGACAATAATGTCAACGTGTATATATCAGTTATTAGCATATCAAACTTCCTCGGCCGAGTCGGCGGTGGCTTTTTCTCAGAGGTTATAGTAAGAAATTTTGCATACTCGAGACTTCTTGCATTGGCAGTGGTTCAAGGAATGATGGCAGTGGGACTCTCCTACTATGCCATGGGTTTGGTTGGTCAAGTTTATGTAGTGGCCATATCAACGGGTTTTGGCTATGGTGCACACTGGTCAATTGCAATTGCTGCAGCTTCGGAGATATTTGGCTTGAAGAACTTTGGAACTTTGTACAATTTTCTCACCGTGGCTAGCCCAACCGGATCTCTATTTTTGTCCGGATTCGTCGCGAGCAAAATATATGACTACTATGCAGAGCAGCAAGCAAAACAGAGAGTGCAGAGTCTTAAGGCCTCATTGAACTTTACATTGCCTTATGTCGCAAGAAACGAAGAATCGCTTGTTTGTGAAGGAAACATATGCTTTTCCCTAACATGTATAATCTTTGCAGTGGTTTGTCTGTTCGCTGCAGCTTTGAGCTTGATCTTAGTCCACCGGACTAAGAGGTTCTATGCGCAACTTCATGTGAAGTCTCTATCTTGA	1800	0.4294	MVVSMQKKNKMKEFIGHRWVVFVCAIWDMSFAGTSYMFGSISPVIKSSMGYNQQQVAFLSVAKDLGDNVGLLAGKISEVSPTWRVILVGVIQNVFGYGLVWLVVTHRLPSLPLWMLCFFIFLGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWTQIVAMISFPDQASLIFVIAVGPAMVSCALMFIIRPVESYNKQSSRSSEDGSGFMFIYSVCLLLAAYLMGVLMLENMFNLDHNTITLIAIVLIILILLPIIVPIFMVFFTQPQNLDQESLLQPETRTSTSTRVVDGETSASSCLVKEDKAQKQTGLPVTERPGKIVKFQAKLSRVISEAVKKLKQKNGPHRGDDFTLSQALMKADFLIMFFSIVLGCGSGLTMINNMGQICQSLGDNNVNVYISVISISNFLGRVGGGFFSEVIVRNFAYSRLLALAVVQGMMAVGLSYYAMGLVGQVYVVAISTGFGYGAHWSIAIAAASEIFGLKNFGTLYNFLTVASPTGSLFLSGFVASKIYDYYAEQQAKQRVQSLKASLNFTLPYVARNEESLVCEGNICFSLTCIIFAVVCLFAAALSLILVHRTKRFYAQLHVKSLS*	600

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy8g2702	599	SUPERFAMILY	MFS general substrate transporter	18	589	IPR036259	-
	Ahy8g2702	599	Pfam	Nodulin-like	18	268	IPR010658	-
	Ahy8g2702	599	Gene3D	MFS general substrate transporter like domains	13	214	IPR036259	-
	Ahy8g2702	599	CDD	MFS_Mch1p_like	17	576	-	-
	Ahy8g2702	599	PANTHER	NODULIN-LIKE/MFS TRANSPORTER	8	598	-	-
	Ahy8g2702	599	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	8	598	-	-
	Ahy8g2702	599	Gene3D	MFS general substrate transporter like domains	367	591	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy8g2702	Ahy-Chr8	50465362	50468745	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy8g2702	8	597	Nodulin-like Gene Family	AT5G14120	49.916	0.0	556

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy8g2702	-		-	gmx:100784744	836.254